| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1065 |
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| Symbol | |
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| ID | 6183484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 926788 |
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| End bp | 927777 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671677 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001797854 |
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| Protein GI | 171463741 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.686479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0244585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG CCCCAATGCG TGTCGCCGTA ACCGGTGCAG CCGGTCAAAT CGGATATTCC
CTTTTATTCC GTATCGCCAA TGGCGACCTT TTGGGCAAAG ATCAGCCCGT AATCCTGCAA
TTGCTTGAGA TTCCTGATGA AAAAGCTCAA AAAGCATTGG CTGGCGTAAT GATGGAGTTG
GAAGACTGCG CATTCCCACT TTTGGCTGGC ATGACTGCTC ACTCCGATCC AATGACCGCT
TTCAAAGACA TCGACGTTGC TCTTTTGGTT GGTGCACGCC CACGCGGTCC TGGCATGGAG
CGCAAAGATT TACTCTCCGC TAACGCACAA ATTTTCACAG CACAAGGTAA AGCATTGAAT
GTTGTTGCTA AGAAGACTGT AAAAGTATTG GTTGTTGGTA ACCCAGCAAA TACCAACGCT
TACATCGCTA TGAAATCTGC TCCAGATATT CCCGCAAAGA ACTTCACAGC AATGTTACGT
CTCGACCACA ATCGCGCGCT CTCACAATTG GCTAACAAAC TGAACAAGCC TGTTGCTGAT
ATTGAGAAGT TAGTGGTTTG GGGTAACCAT AGCCCAACAA TGTACCCTGA CTATCGCTTT
GCAACGATCG ATGGCAAGTC TGTTAAGGAC TCCATCAACG ATGCAGCATG GAACAAAGAT
GTTTTCATTC CTACTGTTGG TAAGCGTGGC GCAGCCATCA TTGAAGCTCG CGGCCTTTCT
TCTGCAGCTT CTGCAGCAAA CGCAGCGATC GATCACATTC ACGACTGGGT TCTCGGTACA
AACGGCAAGT GGGTAACTAT GGGTATTCCT TCTAAAGGCG AGTACGACAT TCCCGCTGAA
GTAATTTATG GCTTCCCAGT TGTTTGCGAA AACGGCGAAT ACAAAATGAT CGAAGGTTTA
GAGATCGATG AGTTCTCACG TGAGCGCATG ACACATACAT TGAATGAATT GCTCGAAGAA
CAAGCTGGCG TTAAGCACTT GCTCTCATAA
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| Protein sequence | MAKAPMRVAV TGAAGQIGYS LLFRIANGDL LGKDQPVILQ LLEIPDEKAQ KALAGVMMEL
EDCAFPLLAG MTAHSDPMTA FKDIDVALLV GARPRGPGME RKDLLSANAQ IFTAQGKALN
VVAKKTVKVL VVGNPANTNA YIAMKSAPDI PAKNFTAMLR LDHNRALSQL ANKLNKPVAD
IEKLVVWGNH SPTMYPDYRF ATIDGKSVKD SINDAAWNKD VFIPTVGKRG AAIIEARGLS
SAASAANAAI DHIHDWVLGT NGKWVTMGIP SKGEYDIPAE VIYGFPVVCE NGEYKMIEGL
EIDEFSRERM THTLNELLEE QAGVKHLLS
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