| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1055 |
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| Symbol | leuD |
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| ID | 6183760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 918453 |
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| End bp | 919100 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671667 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001797844 |
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| Protein GI | 171463731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.206266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAAT TTACGGTATA CAAAGGTTTA GTTGCTCCGC TTAATCGCGA GAACGTGGAT
ACCGATGCCA TCATTCCGAA GCAATTTTTA AAGTCAATTA AAAAGACTGG CTTTGGCCAA
AACCTCTTTG ATGAGTGGCG CTACTTAGAT CATGGTGAGC CAGGACAAGA TTGCAGCACT
CGCCCAATCA ATCCTGACTT TGTTCTTAAT CAGCCGCGCT ACAAGGGCGC AGGCATTTTG
CTGGCTCGTA AAAACTTTGG TTGCGGCAGT TCTCGTGAGC ATGCTCCTTG GGCCTTGGAT
CAATTCGGCT TTAGGGCGGT GATCGCCCCA AGCTTTGCAG ATATTTTCTA TAGCAACTGC
TTCAAAAATG GCGTTTTACC CATTGTTTTG ACAGAAGTGC AGGTCGATCA CCTCTTTAAT
GAAACCCAGG CATTTAATGG CTATCAACTA ACTATCGATC TAGAGGCTCA ACAAGTCATT
GCTCCCGATG GCACTGCCTA TAACTTCGAT GTGGCCCCTT TTAGGAAGTA TTGCCTCCTG
AATGGCTTAG ACGATATTGG CTTAACGCTG CAACATGCAG ATAAAATCAA GGCTTATGAA
GCTGAGCGCA TCCTCAAGAT GTCTTGGCTT GCGACACAAT TGCCGTAA
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| Protein sequence | MEKFTVYKGL VAPLNRENVD TDAIIPKQFL KSIKKTGFGQ NLFDEWRYLD HGEPGQDCST
RPINPDFVLN QPRYKGAGIL LARKNFGCGS SREHAPWALD QFGFRAVIAP SFADIFYSNC
FKNGVLPIVL TEVQVDHLFN ETQAFNGYQL TIDLEAQQVI APDGTAYNFD VAPFRKYCLL
NGLDDIGLTL QHADKIKAYE AERILKMSWL ATQLP
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