| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1053 |
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| Symbol | |
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| ID | 6183337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 916146 |
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| End bp | 917309 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671665 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001797842 |
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| Protein GI | 171463729 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.251388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATGG CAAATACAAA AACACCTTTG GTTGGTTTAG TTGGCTGGCG CGGTATGGTT
GGTAGCGTTT TCATGGAGAG AATGTTGGCT GAGAAAGACT TCGATTTAAT CGAGCCGGTA
TTTTTTAGTA CTAGCCAAGC AGGCGGAGAA GTTCCTTTGC TCAACGGCAA AAAAGTAACC
AAGAGCGAAA ACACATTGCT AGATGCGAAT GACATCAAAG CTTTGTCACG TTGCGACATT
ATCCTAACTT GCCAAGGCGG CGATTACACC AATGACATTT TTCCTAAACT GCGCGCTGCA
GGTTGGAATG GTCATTGGAT CGATGCGGCT AGTGCATTGC GCATGAAAGA TGATGCAGTT
CTGGTTTTAG ATCCCGTTAA TCGCCCGGTA ATTGATAAGG CAATGGCCGC TGGCGGCAAG
AATTGGATCG GTGCCAATTG CACTGTGAGT TTAATGATGA TGGCTATGGG TGGTTTGGTA
AAAGCCGACA TGGTTGAGTG GATTAGTGCC ATGACTTATC AAGCTGCTTC TGGTGCTGGT
GCGCAGAACA TGCGTGAGTT ACTCCTGCAA ATGGGTGCAT TGCGCGATAG CGTTGCTAGT
GAATTGGCTG ATCCATCTTC CTGGATTTTG GATATTGATC GCAAGGTTAC CGAGACATTG
CGTTCTGCCG AATTCCCTAA GAAAAATTTC CGCAATACTG CCTTAGCTGG TAGTTTGATT
CCGTGGATCG ATGTGCCTGT TGAGAATGGC CAAACAAAAG AAGAGTGGAA GGGTGGTGCT
GAGTTCAATA AGATCTTAGG ACGTCCTGCA TTCCGTACTC CCGGCAGTAT TCCAATTGAT
GGTTTATGCG TTCGCGTGGG CGCAATGCGT TGCCATTCTC AAGGTTTGAC TGTAAAGCTC
AAAAAAGATA TTTCACTCAA AGAGATTGAG GCAATTTTGG CTGCTGATAA TCAGTGGGTC
AAAGTAGTTC CGAATGATCG CGAAACAACT GAACGTGATT TATCTCCAGC AGCTATCAGT
GGCACATTGA CGGTACCTAT CGGCCGCTTG CATAAGATGG CAATGGGCCC AGAGTATTTG
GGTGCTTTCA CGGTTGGCGA TCAACTCTTG TGGGGCGCTG CTGAGCCTTT GCGTCGTATG
TTGCGCATTT TGCTTGAGAA GTAA
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| Protein sequence | MIMANTKTPL VGLVGWRGMV GSVFMERMLA EKDFDLIEPV FFSTSQAGGE VPLLNGKKVT
KSENTLLDAN DIKALSRCDI ILTCQGGDYT NDIFPKLRAA GWNGHWIDAA SALRMKDDAV
LVLDPVNRPV IDKAMAAGGK NWIGANCTVS LMMMAMGGLV KADMVEWISA MTYQAASGAG
AQNMRELLLQ MGALRDSVAS ELADPSSWIL DIDRKVTETL RSAEFPKKNF RNTALAGSLI
PWIDVPVENG QTKEEWKGGA EFNKILGRPA FRTPGSIPID GLCVRVGAMR CHSQGLTVKL
KKDISLKEIE AILAADNQWV KVVPNDRETT ERDLSPAAIS GTLTVPIGRL HKMAMGPEYL
GAFTVGDQLL WGAAEPLRRM LRILLEK
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