| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1049 |
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| Symbol | |
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| ID | 6183628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 911935 |
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| End bp | 913128 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671661 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001797838 |
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| Protein GI | 171463725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.548234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGATA AGCCAGATGC ACGAGGACAC TTTGGTCCCT ATGGTGGCGT ATTTGTTTCT
GAGACATTGA TGTATGCATT AGATGAACTC AAAGAGGCCT ATGCAAAATA TCAACACGAT
CCAGAATTCA TTGAAGAGTT TCATTACGAA CTCAAACACT TTGTCGGCAG ACCATCACCG
GTTTATCACG CGAAGCGTTG GAGTGAAATG CTCGGTGGCG CGCAGATCTA TCTCAAGCGT
GAAGACTTAA ACCACACTGG CGCTCACAAA ATTAATAACG TGATTGGTCA AGCAATGCTG
GCCAAGCGCA TGGGTAAACC CCGCATCATT GCAGAGACAG GCGCTGGTCA GCATGGGGTT
GCTACAGCAA CCATCTGCGC ACGTTTTGGT TTGGATTGCA CGGTATATCA AGGGTCTGTT
GACGTTGCTC GTCAAGCGCA AAACGTATTT CGCATGAGGT TACTTGGCGC CAAAGTTGTT
CCCGTGGAAT CTGGCACCAA AACTTTAAAA GATGCGCTGA ACGAAGCAAT GCGCGATTGG
GTAACGAACG TAGACAACAC TTTCTACATT ATTGGCACTG TTGCAGGGCC GCATCCATAT
CCAATGATGG TGCGCGATTT CCAAAGTGTG ATTGGTGAAG AGTGCAAGGC ACAAATGCCA
GAGATGACTG GTCGTCAACC TGACTATGTT TTGGCTTGTG TTGGTGGTGG CTCTAATGCG
ATGGGTATTT TCTATCCGTA TATTGATTTC CCTGAAGTGA AATTGGTGGG AGTTGAAGCA
GCAGGTCATG GTCTAGGTAG TGGTTTGCAT TCAGCAGCGC TCTGTGTTGG TAAGCCAGGC
GTATTGCACG GCAACCGTAC TTACTTATTG CAAGACGAGA ATGGCCAGAT CTCTGAGACC
CATTCTGTTT CTGCTGGCAT GGATTATCCA GGCGTTGGAC CTGAGCATGC TTGGTTAAAA
GATTCTGGCC GCGCGGACTA TGTGGCGATT ACAGATGAAG AGGCGTTGCA GGCATTCCAT
GATTGTTGCC GCATTGAAGG CATCATTCCA GCGCTGGAGT CCTCTCACGC GATTGCTTAT
GTCTGCAAAC TTGCTAAGAC CTTGCCAAAA GACAAGACTA TATTGGTTAA TTTGTCTGGT
CGCGGGGATA AAGATATGCA TACCGTTGCC CAAGCAACGG GATCAGAAGG CTAA
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| Protein sequence | MYDKPDARGH FGPYGGVFVS ETLMYALDEL KEAYAKYQHD PEFIEEFHYE LKHFVGRPSP
VYHAKRWSEM LGGAQIYLKR EDLNHTGAHK INNVIGQAML AKRMGKPRII AETGAGQHGV
ATATICARFG LDCTVYQGSV DVARQAQNVF RMRLLGAKVV PVESGTKTLK DALNEAMRDW
VTNVDNTFYI IGTVAGPHPY PMMVRDFQSV IGEECKAQMP EMTGRQPDYV LACVGGGSNA
MGIFYPYIDF PEVKLVGVEA AGHGLGSGLH SAALCVGKPG VLHGNRTYLL QDENGQISET
HSVSAGMDYP GVGPEHAWLK DSGRADYVAI TDEEALQAFH DCCRIEGIIP ALESSHAIAY
VCKLAKTLPK DKTILVNLSG RGDKDMHTVA QATGSEG
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