Gene Pnec_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1046 
Symbol 
ID6183135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp908904 
End bp910139 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content49% 
IMG OID641671658 
ProductFolC bifunctional protein 
Protein accessionYP_001797835 
Protein GI171463722 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.777875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCG AGCGCATCAA TCGAGTCAAA GCCGCATTAG ATTTGCATTT TGATTGCCCG 
GTGATTACCA TTGCAGGAAC AAATGGCAAA GGATCTACCT GTGCCTTCTT GGAAAGCATT
CTCTTGGCAT CGGGCTATCG AGTAGGTTGC CATACTTCAC CGCATTTACT TCAATTTAAT
GAGCGCGCAC GCATTAATGG CGAAGATGTT AAAGACAATA TTTTGCTTGA GCATTTTGCT
GCAGTTGAAA ATGCGCGAGT GAGTTTGGTT GACGCACCAA CATTGACCTA TTTTGAGTTC
ACCACCTTAG CCATCATGCA TTTGTTTGCC AGATCCAATT TGGATGCGGT TGTGTTGGAG
GTGGGGATGG GCGGCCGTTT AGACGCAGTC AATATTGTGG ATGCTGATTG CGCTATTGTG
ACCAGCATCG ATATTGACCA CGCTGATTTC TTGGGTGGCA CACGTGAGGC CATTGGATTA
GAAAAGGCAG GCATATTCCG TCCAGGACAT ATTGCAGTAT GTGGAGATCC CGTTCCACCG
CAATCACTTA TCGATAATGC TGAAAAGTTG GGTTGTGATT TATGGTTACA AGGACGTGAT
TACAACTTTC AAGGTGATAA ACAGCAGTGG GGTTGGGCAG GGCGCAATAA GCGTTTTAGC
GGCCTTGGTT ATCCAGCGTT ACGTGGAGCA AATCAGATTC TGAATGCATC AGCTGTCATT
GCCGCTTTAA TGGCATTGCA CCAACGCCTC CCAGTTAGCG CCCAAGATAT TCGTAATGGC
TTTGCACTGG TTGAGCTGCC AGGACGCTTC CAAGTATTGC CGGGTCAGCC TACTGTTGTA
TTGGATGTGG CCCACAACCC CCATGCCGCA GCCACATTGG CTCAGGGACT CGATAAGATG
GGTTATCACC CCTACACCTA TGCCATTTTT GGGGCTATGG CTGACAAGGA TATTGAGGGG
GTGATCAAGC CCCTCCTAAA TATCGTCGAT TTCTGGTTTT GCACCGATTT ACCCACTCCC
AGAGCGGCTA GCGCTGAGGC TCTGGCTGAG AAGCTTGAAT CCATGGGCGT CAAGCCAAAG
AATGGGGCAG ATGGCGGTAT TGAATGTTTC CCAGAACCCA CTTTGGCGTA TCAAAAAGCG
CTATCTTTGG CAGGTGAGGG TGATAGAATT GTGACCTTCG GATCCTTCTA TACCGTTGCA
GGCGTAATGA CTTACCGAAA CAACCAGGCC CACTGA
 
Protein sequence
MGLERINRVK AALDLHFDCP VITIAGTNGK GSTCAFLESI LLASGYRVGC HTSPHLLQFN 
ERARINGEDV KDNILLEHFA AVENARVSLV DAPTLTYFEF TTLAIMHLFA RSNLDAVVLE
VGMGGRLDAV NIVDADCAIV TSIDIDHADF LGGTREAIGL EKAGIFRPGH IAVCGDPVPP
QSLIDNAEKL GCDLWLQGRD YNFQGDKQQW GWAGRNKRFS GLGYPALRGA NQILNASAVI
AALMALHQRL PVSAQDIRNG FALVELPGRF QVLPGQPTVV LDVAHNPHAA ATLAQGLDKM
GYHPYTYAIF GAMADKDIEG VIKPLLNIVD FWFCTDLPTP RAASAEALAE KLESMGVKPK
NGADGGIECF PEPTLAYQKA LSLAGEGDRI VTFGSFYTVA GVMTYRNNQA H