| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1044 |
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| Symbol | |
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| ID | 6183130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 907528 |
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| End bp | 908094 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671656 |
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| Product | Colicin V production protein |
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| Protein accession | YP_001797833 |
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| Protein GI | 171463720 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.572812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACT TATCCACCCT CAAGCTAACA TCGGTGGATT ACTTCACCCT AGTTGTGCTC
TTGATTTCTG CGTTAGTTGG CATCTCCCGT GGATTATTTA AAGAAGTGCT TGCCTTGGCA
TCTTGGTTTG CTGCGGCTTG GGTCGCTTAT CACTACAGCA ACTACCTCTC TATAGAATGG
CTCTCCACAT TTCACTTAGA TGAGCTACTT AGCTTGGGTG TGAGCTTCCT CATTTTATTT
GTATTGACTC TTATCGTTTG CGGCCTATTT GGTGGGGTGG TGCAAAAAAT TATCCTGTCA
GTTGGCTTGA ATTTGACTGA TCGTTTCTTA GGTTTGATAT TTGGTGTGTT GCGCGGCGGC
TTGATCGTAG TCGTTCTTGC AACTTTGGCT GCGCTTACTC CAATTCCACA AAGCATGGCT
TGGAAGAACG CTATTACCAG GCCCGCAATT GATATGGCAA CCGGTTTAAT TAAAGATTGG
CTTCCTGCTG ACTGGGCGAA GCAATTGGGT GATGTTGTGC CTAAAGTTAC CCCTACCATT
ACTCCTAAAT TAACAATAGG AATCTAG
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| Protein sequence | MEYLSTLKLT SVDYFTLVVL LISALVGISR GLFKEVLALA SWFAAAWVAY HYSNYLSIEW
LSTFHLDELL SLGVSFLILF VLTLIVCGLF GGVVQKIILS VGLNLTDRFL GLIFGVLRGG
LIVVVLATLA ALTPIPQSMA WKNAITRPAI DMATGLIKDW LPADWAKQLG DVVPKVTPTI
TPKLTIGI
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