Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1043 |
Symbol | |
ID | 6183383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 905985 |
End bp | 907523 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671655 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001797832 |
Protein GI | 171463719 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.603388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGCG TCGTCGGAAC TATTTCCCAC TCACCAGTAA ATCAACTTCT CTATGATGCC TTGTTGCTTT TGCAACATCG CGGTCAAGAC GCTGCCGGTA TTGCTACGAT GAACGGTAAT TCGTTCACGA TGCATAAAGC CAATGGCTTA GTGCGAGATG TTTTCAGAAC ACGCAATATG CGCAGCTTAG TAGGAAACGC GGGTATTGGT CAGGTGCGTT ACCCAACCGC TGGATCAGCA AGTAGTGAAG AGGAGGCTCA ACCTTTTTAT GTGAGCGCTC CTTATGGGAT TATCTTGGCT CATAACGGCA ATCTAACCAA TGCACCAAGC TTGCGGGTTG AGATGGCATA TCGGGATCGT CGTCACATCA ATACGAGCTC TGACACTGAG GTGCTACTCA ACGTCTTAGC TGATGAGCTT CAAAAAGAAA CTAATAGTGC AGCGCTTGAT GAGGGCGCGA TGTTTAATGC CGTCACCGGA GTAACAAATC GCGTTAAAGG TTCTTATGCT GTAGTTTCTT TAATTGCAGG TTATGGCTTG TTAGCCTTCC GTGATCAGTA CGGTATTCGT CCTCTATGTA TTGGTCGTAT CGATACTCCA CAGGGTCCTG AGTGGATGAT TGCATCTGAG TCAGTTGCTC TTGAAGGCTT GGGCTTTACG TTTGTACGTG ATGTCAATCC AGGTGAAGCA ATCTATATTG ATTTGGATGG CAATTTTTAT TCACGTCAGT GCGTACCGAA TGCAGTGCTG ACTCCCTGCA TTTTTGAATA CGTCTACATG GCTCGTCCCG ACTCTACTAT TGATGGCGTT ACTGTCTATA ACGTGCGTAT GCGCATGGGC GATTACTTGG CTGAGAAGAT TCGCAAAGAG ACTAATGTTA ATGAGATCGA CGTAGTGATG CCAATTCCAG ACTCGAGTCG CCCAGCAGCA ATGCAGGTTG CCAAGAATTT AGGCGTTGAT TACCGCGAAG GTTTCTTTAA AAACCGTTAT ATCGGTCGTA CTTTCATCAT GCCAGGGCAG GCTGTTCGCA AGAAGTCTGT ACGTCAAAAA CTCAATGCAA TGCGTATCGA ATTTAAAGAT AAGACGGTGT TAATTGTGGA TGACTCCATC GTACGCGGAA CCATCTCCTT TGAGATTGTG CAGATGGCTC GCGAATCCGG TGCTAAGAAA GTGATCTTTG CTTCTGCTGC GCCACCGGTG CGCTTCCCGA ATGTATATGG CATTGATATG CCTACTCGTA GTGAGTTGGT AGCCTATGGC CGTACCGATG AAGAAATCAA CAAGATGATT GGTGCTGATC AGTTGATTTA TCAGAGCGTA GAGGATATGA AGCAGGCTGT TAGGGACATT AACCCGAATA TTCAAAACTT TGAAGCTTCT TGCTTCGATG GTTTTTATAT CACAGGCGAT ATTACCGAGT CCTACCTTGA TGCTCTAGAA GCAGCTAGGA ATACCTCAGC TGCTAAAGCT GACCGTCAGA AGGATTCGAG TGACTTTGCT CGCTCCCAAC TCCATCTGCA TTTAGCTACC GAAGACTAA
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Protein sequence | MCGVVGTISH SPVNQLLYDA LLLLQHRGQD AAGIATMNGN SFTMHKANGL VRDVFRTRNM RSLVGNAGIG QVRYPTAGSA SSEEEAQPFY VSAPYGIILA HNGNLTNAPS LRVEMAYRDR RHINTSSDTE VLLNVLADEL QKETNSAALD EGAMFNAVTG VTNRVKGSYA VVSLIAGYGL LAFRDQYGIR PLCIGRIDTP QGPEWMIASE SVALEGLGFT FVRDVNPGEA IYIDLDGNFY SRQCVPNAVL TPCIFEYVYM ARPDSTIDGV TVYNVRMRMG DYLAEKIRKE TNVNEIDVVM PIPDSSRPAA MQVAKNLGVD YREGFFKNRY IGRTFIMPGQ AVRKKSVRQK LNAMRIEFKD KTVLIVDDSI VRGTISFEIV QMARESGAKK VIFASAAPPV RFPNVYGIDM PTRSELVAYG RTDEEINKMI GADQLIYQSV EDMKQAVRDI NPNIQNFEAS CFDGFYITGD ITESYLDALE AARNTSAAKA DRQKDSSDFA RSQLHLHLAT ED
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