Gene Pnec_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1037 
Symbol 
ID6183212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp902418 
End bp902708 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content48% 
IMG OID641671649 
Productcytochrome c class I 
Protein accessionYP_001797826 
Protein GI171463713 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.692369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCATG CTAAAGATAC TCATGCGAAT GTTCCAAAGG GTCCTGCAGT CTTATTTAAG 
AATGAGAATT GCTCGGCCTG TCATGCACCA AATGCTAAGC TCGTTGGACC TTCTATTGCG
GATATTTCAG CGAAGTACCA GGGTCAGAGT GGAGTGGTTG ATAAATTGAT GGCCAAGGTC
AAGAATGGCG GCTCAGGAGT TTGGGGTTCT ATTCCGATGC CTCCGCAATC CCAATTGTCT
GATGAGGATC GTAAAACGCT AGTGGTTTGG GTGCTCTCAG GCGGCAGATA A
 
Protein sequence
MAHAKDTHAN VPKGPAVLFK NENCSACHAP NAKLVGPSIA DISAKYQGQS GVVDKLMAKV 
KNGGSGVWGS IPMPPQSQLS DEDRKTLVVW VLSGGR