Gene Pnec_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1035 
Symbol 
ID6184334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp901541 
End bp901849 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content42% 
IMG OID641671647 
ProductSulphur oxidation protein SoxZ 
Protein accessionYP_001797824 
Protein GI171463711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.876216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.48682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC CAATGCGCGT TAGAGCTGCT GAGAACGGTG GAATTGTGGA TGTAAAAATT 
TTGATGAAGC ACGATATGGA ATCTAGTCAG CGTAAAGACG CTTCCGGTAA AACAATTCCA 
GCATGGTTCA TTAGCACAAT CAACGTTAAA GCAAACGGTA AAGATGTATT GAATGGACAG 
TTTGGTCCAG CAGTTTCTAA GGATCCATTC TTGAACTTTA AATACAAAGG CGCCAAAGGC 
GACAAGATTG TTGTTAGCTG GGTAGATAGC AAGGGTGATA AACGTACTGA CGAAGTAACC 
GCTTCTTAA
 
Protein sequence
MADPMRVRAA ENGGIVDVKI LMKHDMESSQ RKDASGKTIP AWFISTINVK ANGKDVLNGQ 
FGPAVSKDPF LNFKYKGAKG DKIVVSWVDS KGDKRTDEVT AS