| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1030 |
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| Symbol | |
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| ID | 6184384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 896841 |
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| End bp | 897779 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671642 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001797819 |
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| Protein GI | 171463706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.932178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.324338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG GCAAAATTTA CACATCTTGT TTGCAGTATT TAACCTCGAT CCTATTGGGA
TACTTTGTCT TTTTTGGTTC AGCTTTTGCG CAAAGCCAAC ATAGTGATGC GATACAGCTA
AAACCCATAC AGGTTGCACC CAACACTTAT TTTGTCCAAG GCTTTCCTGA GATGGGGAGC
AGTGTCAATC AAAATTTTAT TTCCAACGCA GGGTTTGTTG TAACTCCAGC AGGTGTAGTG
GTAGTTGATG CGCTGGGCTC ACCGATTCTT GCACAAAAGC TTATTGCTGA AATTAAGAAA
ATTACACCGC AAAAAATAGT AGTCATTATT GTTAGTCATT ATCACGCTGA CCACGTCTAC
GGATTGCAAG AATTTAAAAA GATTGGCGCA AAGATTTATG TGCAAGGCGA GGGTAGAAAT
TATTTGTCTT CCGAGACCGC TAAGCAACGC CTAATCGCCT CAAGAGTCGA TTTTGCTCCT
TGGGTCAATG CAAACACCCG GCTGATTTCT GCTGACGTGT GGATTGATCA AAAAACAAAT
TTGACTATTG GTGGAGTAGA TTTTTTCGTT AGCAGGGTGG GTCCTGCTCA CGCACCTGAA
GATCTCATGG TGTATGTTCC ATCAGAGAAA GTCCTGTTTG CAGGGGACTT AATTTTTAGG
GGTCGAATTC CGTTTGTGGG TAATGCTGAC AGCAAAGGTT GGCTAATTGC TTTAGATGAG
ATTGAAAAAT TAAACCCCAA TATCGTGATT TCAGGTCACG GTAATTATTC AGTTAAGCTT
GCTGAAGATA TTGCTTTCAC CAGGGATTAC CTCAAATATT TGCGAGAATC CATGTCCAAT
GCGGCAATTG ACCTCGATCC TTTTGAGAGG ATGCTTATAA ACAGGCAGAT TGGTCGGAAT
ATGGGGGAAT GCCTCTTTTT AGGGCTGCCA ATCGCATGA
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| Protein sequence | MSFGKIYTSC LQYLTSILLG YFVFFGSAFA QSQHSDAIQL KPIQVAPNTY FVQGFPEMGS
SVNQNFISNA GFVVTPAGVV VVDALGSPIL AQKLIAEIKK ITPQKIVVII VSHYHADHVY
GLQEFKKIGA KIYVQGEGRN YLSSETAKQR LIASRVDFAP WVNANTRLIS ADVWIDQKTN
LTIGGVDFFV SRVGPAHAPE DLMVYVPSEK VLFAGDLIFR GRIPFVGNAD SKGWLIALDE
IEKLNPNIVI SGHGNYSVKL AEDIAFTRDY LKYLRESMSN AAIDLDPFER MLINRQIGRN
MGECLFLGLP IA
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