| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1028 |
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| Symbol | |
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| ID | 6183282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 895271 |
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| End bp | 896392 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671640 |
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| Product | protein of unknown function DUF395 YeeE/YedE |
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| Protein accession | YP_001797817 |
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| Protein GI | 171463704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2391] Predicted transporter component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTG TGGATATTAA TTCTTTAAGT AAGTCAGTTC TCTGGGCAAC TTTTGCTATT
ACCTTTTTTC TCGGTGCCGT TATGCAAAAG ACGGGATTTT GTAGCATGGG TGCAGTTTCT
GACGTATTCA TCATGTCTAG TTGGGATCGC TTAAAGCAAT GGTTCCTGGC TATCGGTGTA
GCCATTATTG GTTTTACTTT GATGTCGTAT TTGGGCTTGA TCGATCCTCT AAAAAGTTTT
TATACCGGCA ATAAATTTTT ATGGCTCTCC ACAATCGTTG GAAGCGTTTT ATTTGGCCTG
GGTATGGTTT TAGCGTCAGG GTGCGGTAGC AAAACCTTGA TCCGTATTGG TGGCGGTAAC
TTAAAGTCCT TTGTGGTGTT TATGGTTCTG GGATTAACGG CCTATATGAC GATGCGTGGT
TTTCTGGGTG TTGTACGAAT CAATACGTTG GATACTTTTT TCATTGCCTT TAATGCGCCG
CAAGATTTAC CTAGCCTTTT GAGTGCGCCT CTTGCTATTG CTCGTCCTCA ACTTCATCTA
GCGCTTGGTT TAATCATTGG CGCAGCATTC ATTGCTTATG CCTTGGCTAG CAAAGCATTC
TGGACTGCTG AAAATTTGTT CGCAGGCATT GCTGTTGGCT TGGCGATTTG TGCGGTATGG
TGGGTTTCTG GTAATTTGGG GTATGTTGCT GAAGATCCAA ATACTTTAGA GGAAGTATTT
CTTGTAACAA ATTCAGGACG TATGGAGAGC TTATCGTTTG TGGCGCCTTA CGCTTATTCA
TTGGATTGGC TTATGATGTA CAGCGATACA TCTAAGATGC TAACAGTTGG CATCATGGCC
GTTCTAGGGA TGATTTTAGG TTCTGCTGTG GTATCAATTG CTACAAAATC ATTTCGCTGG
GAGACTTTCC GCAACACTAA AGATACGGCC AATCACTTGG TTGGTGCTGC ATTAATGGGC
TTTGGTGGTG TTACTGCTTT AGGTTGCACC GTGGGGCAGG GTTTAAGTGG CATTTCTACT
TTAGCACTTG GTTCGCTTAT TGCATTACCA GGATTTATAT TTGGAGCATA TTTAGGTTTG
CGTTATTTGC AAATGCGTCT TGCTCCTAAC CCTTGTAGTT AA
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| Protein sequence | MDVVDINSLS KSVLWATFAI TFFLGAVMQK TGFCSMGAVS DVFIMSSWDR LKQWFLAIGV
AIIGFTLMSY LGLIDPLKSF YTGNKFLWLS TIVGSVLFGL GMVLASGCGS KTLIRIGGGN
LKSFVVFMVL GLTAYMTMRG FLGVVRINTL DTFFIAFNAP QDLPSLLSAP LAIARPQLHL
ALGLIIGAAF IAYALASKAF WTAENLFAGI AVGLAICAVW WVSGNLGYVA EDPNTLEEVF
LVTNSGRMES LSFVAPYAYS LDWLMMYSDT SKMLTVGIMA VLGMILGSAV VSIATKSFRW
ETFRNTKDTA NHLVGAALMG FGGVTALGCT VGQGLSGIST LALGSLIALP GFIFGAYLGL
RYLQMRLAPN PCS
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