Gene Pnec_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1027 
Symbol 
ID6184217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp894810 
End bp895247 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content46% 
IMG OID641671639 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001797816 
Protein GI171463703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.77187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.911099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG ACTGGTTTTC TTTTACCCCC GTTCCTTCAT TATTGGGTGG GATGATTCTC 
GGTATCGCAG CAGCCCTGTA TGTGCTATTA CATGGTCGTA TTTTAGGTAT TAGCGGAATT 
GTTTCTGGCT TGCTTCATCC TAAATTAGCT GATTCAGCTT GGCGTATTTG CCTAGTTTTG 
GGATTGATTA GCGCTCCTTT TCTGGCGGCA TTGTTTTTTG GCATATTCCC CGTGGTGGAG 
ATTAAATCCG ACTGGATTGC GATGGTGATT GCTGGCCTCC TGGTTGGGTT TGGCGCTCAA 
TATGGATCGG GCTGTACCAG TGGGCATGGA ATTTGCGGTC TTTCCCGTCT GTCACCGCGT 
TCGTTAGTGG CAACACTCTC GTTTATGGGT GTAGGCTTTA TTATTGTTTA TGTTCTTCGC 
CATTTGATCG GACTTTAA
 
Protein sequence
MQIDWFSFTP VPSLLGGMIL GIAAALYVLL HGRILGISGI VSGLLHPKLA DSAWRICLVL 
GLISAPFLAA LFFGIFPVVE IKSDWIAMVI AGLLVGFGAQ YGSGCTSGHG ICGLSRLSPR 
SLVATLSFMG VGFIIVYVLR HLIGL