Gene Pnec_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1018 
Symbol 
ID6183823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp888802 
End bp889071 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content47% 
IMG OID641671635 
Productprotein of unknown function DUF1289 
Protein accessionYP_001797812 
Protein GI171463699 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0740712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.654271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAG GAAGTAATGA CACTAAATCA GCCCCACAAA ATAGTTCACA CTCGCTTTCA 
ATCGGTGACA ATGAATCGGA TTCACCCTGC ATTGGCGTCT GCACCACACT GTATGACGAG
ATCTGCCAAG GCTGTGGTCG CACACTCAAT GAAGTGAGTA ATTGGGTGCT CTTTTCTGAT
GATGAAAAAG CATCTGTGTG GAAGCGCATT CGCGCAGAAG GCACTGCCAC TCGTTTTCAA
CGACAAGCTC AAGAGAACAA GCCCGTCTAA
 
Protein sequence
MNSGSNDTKS APQNSSHSLS IGDNESDSPC IGVCTTLYDE ICQGCGRTLN EVSNWVLFSD 
DEKASVWKRI RAEGTATRFQ RQAQENKPV