Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1018 |
Symbol | |
ID | 6183823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 888802 |
End bp | 889071 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641671635 |
Product | protein of unknown function DUF1289 |
Protein accession | YP_001797812 |
Protein GI | 171463699 |
COG category | [R] General function prediction only |
COG ID | [COG3313] Predicted Fe-S protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0740712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.654271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAG GAAGTAATGA CACTAAATCA GCCCCACAAA ATAGTTCACA CTCGCTTTCA ATCGGTGACA ATGAATCGGA TTCACCCTGC ATTGGCGTCT GCACCACACT GTATGACGAG ATCTGCCAAG GCTGTGGTCG CACACTCAAT GAAGTGAGTA ATTGGGTGCT CTTTTCTGAT GATGAAAAAG CATCTGTGTG GAAGCGCATT CGCGCAGAAG GCACTGCCAC TCGTTTTCAA CGACAAGCTC AAGAGAACAA GCCCGTCTAA
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Protein sequence | MNSGSNDTKS APQNSSHSLS IGDNESDSPC IGVCTTLYDE ICQGCGRTLN EVSNWVLFSD DEKASVWKRI RAEGTATRFQ RQAQENKPV
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