| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1010 |
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| Symbol | thrS |
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| ID | 6184327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 878357 |
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| End bp | 880279 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671627 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001797805 |
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| Protein GI | 171463692 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTAG TTACTCTGCC AGATGGATCA AAACGTGAGT TTGAGGCGCC CGTTCGTGTA
GCGGATGTTG CGCAAAGCAT CGGTAGTGGT CTTGCAAAAG CTGCTTTAGG CGGCATTGTT
GATGGCAAGA TGGTCGACAC CAGCTTTGTG ATCGATAAAG ACAGTCAACT GGCCATCATC
ACTGATAAGA GCCCTGAAGC ATTAGAGATT GTTCGTCACT CCACTGCTCA CTTATTGGCC
TATGCTGTAA AGGAGTTATT TCCAGAAGCT CAGGTAACTA TTGGTCCAGT GATCGAGAAT
GGTTTTTACT ATGACTTTTC GTATCACCGC CCATTTACTC CAGATGACTT AGTTGCTTTA
GAAAAGAAAA TGACTGAGCT CGCTAAAAGA GACGAGCCAG TAACGCGCAC CGTAATGCCA
CGTGATGAAG CAGTTGAGTT TTTTAAAAAG CAAGGCGAGA ACTACAAAGC AGAACTGATT
GCGAGCATTC CGCAAGGCGA AGATGTTTCC TTGTATGCAG AAGGTAAGTT CACCGATTTA
TGTCGCGGAC CCCACGTGCC ATCTACTGGA AAGCTGAAGG TATTTAAACT GATGAAGCTA
GCTGGTGCTT ACTGGCGTGG CGATAGTAAA AATGAAATGT TGCAGCGTAT CTACGGTACT
ACTTGGCTAC GTAAAGAAGA TCAAGATGCT TACCTGCATA TGCTTGAGGA GTCTGAGAAG
CGTGATCATC GCCGCCTCGG CAAGCAACTC GATTTATTCC ATTTCCAAGA GGAAGCGCCC
GGATTAATTT TCTGGCATCC AAAGGGTTGG TCGATTTGGC AGGAAGTTGA GCAATACATG
CGTCGCGTGT ATCAGCAAGA AGGCTACCAA GAAGTTAAAG CACCGCAGAT TTTGGATCGT
GGTCTTTGGG AAAAATCAGG CCACTGGGAA AACTACAAAG AAAATATGTT TACGACAGAG
TCGGAGAATC GTGCTTATGC ATTAAAGCCG ATGAACTGTC CTGGGCATGT GCAAATTTAT
AACTCTGGAT TGCATAGCTA CCGTGAGTTG CCATTGCGTT TTGGTGAGTT TGGCCAATGT
CACCGCAATG AACCATCAGG TGCTTTGCAT GGTCTGATGC GCGTGCGTGG CTTCACACAA
GATGATGGCC ATATTTTCTG TACCGAAGAC CAAATTCAGT CTGAAGTAGC CGCATTTGAT
AAAGCAGTGC GCGCTGTTTA TCAAGATTTT GGTTTTACTG AGGTTGCTGT GAAGCTCGCT
CTTCGTCCGG CAAAGCGTGT TGGCGATGAC GCCATTTGGG ATAAGGCTGA AGAGGCCTTG
CGCGGCGCAT TGAAGGCTTC TGGCCAAGAG TGGGAAGAAT TGCCAGGCGA GGGCGCTTTT
TATGGTCCGA AGATCGAGTA TCACCTTAAG GACTCGATTG GGCGTACTTG GCAGTGCGGC
ACGATTCAGG TCGATTTCTC TATGCCAGCC CGATTGGGCG CTGAATATGT AGCTGAAAAT
AATAGCCGCA AGACCCCAGT AATGCTCCAT AGGGCAATTG TCGGCTCTTT AGAGCGTTTT
ATCGGCATTT TGATTGAAAA TCACACTGGA AACATGCCTG TTTGGCTTGC TCCTACCCAG
GCTGTAGTCC TTAATATCTC CGGAAATTCT GCTGCATATG CACAACAAGT GCAGCAATTG
CTGAAAAAAC AAGGGTTTAG AATCGAATCG GATTTGCGAA ACGAGAAAAT TACGTATAAA
ATACGCGAGT ACGCATTACA GAAGACCCCG TTTTTGCTTA TTGTAGGGGA TAAAGAATCT
GAAAGTAATA CGGTGGCCGT TCGTGCCCGT GGCGGAGTTG ATTTAGGTGT AATGCCTCTT
GATGCCTTCG TTGCCCGACT CCAGCAGGAT ATATCCCAGA AAGTCGGACC CGAGCCTAGC
TAG
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| Protein sequence | MLVVTLPDGS KREFEAPVRV ADVAQSIGSG LAKAALGGIV DGKMVDTSFV IDKDSQLAII
TDKSPEALEI VRHSTAHLLA YAVKELFPEA QVTIGPVIEN GFYYDFSYHR PFTPDDLVAL
EKKMTELAKR DEPVTRTVMP RDEAVEFFKK QGENYKAELI ASIPQGEDVS LYAEGKFTDL
CRGPHVPSTG KLKVFKLMKL AGAYWRGDSK NEMLQRIYGT TWLRKEDQDA YLHMLEESEK
RDHRRLGKQL DLFHFQEEAP GLIFWHPKGW SIWQEVEQYM RRVYQQEGYQ EVKAPQILDR
GLWEKSGHWE NYKENMFTTE SENRAYALKP MNCPGHVQIY NSGLHSYREL PLRFGEFGQC
HRNEPSGALH GLMRVRGFTQ DDGHIFCTED QIQSEVAAFD KAVRAVYQDF GFTEVAVKLA
LRPAKRVGDD AIWDKAEEAL RGALKASGQE WEELPGEGAF YGPKIEYHLK DSIGRTWQCG
TIQVDFSMPA RLGAEYVAEN NSRKTPVMLH RAIVGSLERF IGILIENHTG NMPVWLAPTQ
AVVLNISGNS AAYAQQVQQL LKKQGFRIES DLRNEKITYK IREYALQKTP FLLIVGDKES
ESNTVAVRAR GGVDLGVMPL DAFVARLQQD ISQKVGPEPS
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