| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1005 |
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| Symbol | pheT |
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| ID | 6182929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 873512 |
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| End bp | 875968 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671622 |
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| Product | phenylalanyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001797800 |
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| Protein GI | 171463687 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTT CTGAATCTTG GCTCCGTCAG TATGTAAACC CATCACTTGA TAGTGATGGG
CTTGGTCATG TAATGACTAT GGCGGGTTTA GAGGTTGAAG AGCAACATTC AGTAGCGCCT
GCATTTACCA AGATTGTGAT TGCACAGATC CTTTCTGCTG AGCAGCATCC TGATGCGGAC
CGTTTGCGTG TTTGTAAAGT AGATGCCGGT ACTGGTCAAG AGTTGCAAAT CGTTTGCGGT
GCACCTAATG CGCGCGCTGG TATTAAGATT CCTTGCGCTA TGGTTGGTGC CGAACTGCCA
CCAGCTGAAG TGGGTGGCAA GCCTTTCATG ATTAAGGTTG GCAAGCTGCG TGGCGTTGAA
AGCCAGGGCA TGCTGTGCTC TGGTCGTGAG CTCGGTTTAG GTGATGATCA TGAAGGTATC
TTAGAGTTGC CTACTGATGC ACCAGTTGGA AAAGATATTC GTGAATACCT TAATCTCGAT
GACCAAATCT TCGTCATTAA ATTAACGCCG AATAAGGCTG ATTGCCTCTC ATTAATGGGT
ATGGCAAGAG AAGTATCAGC CATCACTGGC GCTGCACTCT GCGGACCTGA GTGGACTCAA
CCTGCTGTAA CAATTCAAGA TAAGCTTAGA GTAGCTATAG AGAGCAAAGA GCTTTGCGGT
CGCTTTGCTG GTCGTGTAAT TCGTGGCGTA AATCTGCAAG CTAAAACCCC TGAATGGATT
GTGCAACGTT TAAATCGCGC AGGCCAAAGA AGTATTTCAG TTTTGGTTGA TCTATCTAAC
TATGCGATGT TAGAAATGGG TCAGCCTACA CACGTATTTG ATATCGATAA ATTGAATGGC
GATATCACTG TGCGATGGGC TAAGTCAGGC GAAACACTTG AGTTATTAAG TGGTCAGACA
GTGACTTTGC AGGGTCCAGA TTCTGCAGGA AGGATGCAAG AAGCAGGCGT TGTTGCTGAT
CAGAATGGTC CGGCAGCACT TGCGGGCATC ATGGGTGGCA ATCATTGCGC TGTAACTGAT
GACACTAAGA ATGTCTATGT TGAAGCGGCG TATTGGCTGC CTTCAGCCAT TCAAGGCCGC
GCTCGTCGCT TTAATTTCAG TACAGATGCA GCGCATCGTT TTGAGCGTGG CGTTGATCCA
CAGAATACGG TTAATTGCCT GGAATATCTT AGCGCCTTAA TTATTGAGGT CTGCGGTGGT
CAAGCAGGCC CAGTAGATGA TCAGGTTCTC AATATTCCAG AGCGTAAGTC AGTAAAAATG
CGTTTGGCCA GAGCGGAAAA AGTCATTGGC ATTCCATTGA CTAATGAGAT TGTTGCGGAC
GTATTCAAAC GTCTCGGTTT TGAATTCAAG CAAGAAGCGG ATGTATTTAT TGTTACGCCT
CCAAGCTATC GTTTTGATAT TGAAATAGAA GAAGATTTAA TTGAAGAAGT CGCGCGTATG
TACGGCTTTG AAAATATTCC CGATCAACCG CCAGTGGCTT CATTGAAGAT GAGCGCTAAA
GCAGAAGCGA AGCGTGGCAT TCATTTGCTG CGTCAACGTT TTGCTTTGCA AGGCTACCAA
GAGGCGGTGA ATTTTGGTTT TACGGATCTT GAAAATGAGC AGCGCCTTGC GGGTGCCCAA
GAACAGGATC TGATTAAGGT TCTCAACCCG ATCGCCAATC GGTATGGCGT GATGCGCAGC
ACATTGTGGG GTGGATTGCT AGGTAACCTC AGGGCCAATT TAAATCGCGG AGCTGGGCGT
GTGCGCTTAT TTGAGGCTGG ACGCGTATTT AAACGTGATG CTAGCGCTCT AGAAGAAGCT
GGCAAAGTTG CAGGCTTTCA TCAGCCGCAA AAAATCGGTG GCTTAGCTTA CGGTTCATTT
GTTCCAGAGC AATGGGCCAA TGCAACGCGT GCGGTAGATT TTTTTGACGT GAAGGGTGAT
CTTGAGCGCG TTTTGGATCC ACTGCAATTC GTAACGGAGG CAGCACAGCA TCCAGCACTG
CATCCCGGTC GTTCGGCTCA AGTAATCATG AGGGCTGGCA AAAGTAATAT TGTGATTGGT
TGGATTGGTG AATTGCACCC TGGTCTGCAA CAAACTTATG AGTTACCACA AGCGCCAGTC
TTGTTTGAAT TGGATTTGGA TCCAATTCGC GAGCTCGGTT TGCCTGTGCC TGAAGAATTG
AGTAAATTCC CTGCAGTGCA GCGTGATTTG GCTTTGGTGG TGAAGCAAGT CGTTTCTGTG
CAATCCTTAT TGGATGCTAT GGCTGCAAGC AAGCAGAATT TTGTGCGCAA GATTGAGTTC
TTTGATGAGT TCAAGCCTAA GACGGGCTCT AGTAGCATGG CGGAAGATGA AAAGAGTTTA
GCTTTCCGGG TAACCCTCTT AAATGCACAA GAAACATTAC AAGATCCCCA AATTGATGCG
GTAATGGCTG CTTTATTGGC GGCTGTTGAG AAAAAGTGCG CAGCGCGTCT GCGCTAG
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| Protein sequence | MQFSESWLRQ YVNPSLDSDG LGHVMTMAGL EVEEQHSVAP AFTKIVIAQI LSAEQHPDAD
RLRVCKVDAG TGQELQIVCG APNARAGIKI PCAMVGAELP PAEVGGKPFM IKVGKLRGVE
SQGMLCSGRE LGLGDDHEGI LELPTDAPVG KDIREYLNLD DQIFVIKLTP NKADCLSLMG
MAREVSAITG AALCGPEWTQ PAVTIQDKLR VAIESKELCG RFAGRVIRGV NLQAKTPEWI
VQRLNRAGQR SISVLVDLSN YAMLEMGQPT HVFDIDKLNG DITVRWAKSG ETLELLSGQT
VTLQGPDSAG RMQEAGVVAD QNGPAALAGI MGGNHCAVTD DTKNVYVEAA YWLPSAIQGR
ARRFNFSTDA AHRFERGVDP QNTVNCLEYL SALIIEVCGG QAGPVDDQVL NIPERKSVKM
RLARAEKVIG IPLTNEIVAD VFKRLGFEFK QEADVFIVTP PSYRFDIEIE EDLIEEVARM
YGFENIPDQP PVASLKMSAK AEAKRGIHLL RQRFALQGYQ EAVNFGFTDL ENEQRLAGAQ
EQDLIKVLNP IANRYGVMRS TLWGGLLGNL RANLNRGAGR VRLFEAGRVF KRDASALEEA
GKVAGFHQPQ KIGGLAYGSF VPEQWANATR AVDFFDVKGD LERVLDPLQF VTEAAQHPAL
HPGRSAQVIM RAGKSNIVIG WIGELHPGLQ QTYELPQAPV LFELDLDPIR ELGLPVPEEL
SKFPAVQRDL ALVVKQVVSV QSLLDAMAAS KQNFVRKIEF FDEFKPKTGS SSMAEDEKSL
AFRVTLLNAQ ETLQDPQIDA VMAALLAAVE KKCAARLR
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