Gene Pnec_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1003 
Symbol 
ID6183050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp872903 
End bp873145 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content49% 
IMG OID641671620 
Productputative transcriptional regulator, MerR family 
Protein accessionYP_001797798 
Protein GI171463685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA AAACCGAGTT TGATGCCAGC TCAGTACTGC TGAGCTCTCA ACTTCCTCCA 
ATTCCTGCTA AGCGCTATTT CACTATTGGT GAGGTAGCCG ACCTATACGG CGTTCGCTCG 
CATGTTCTGC GCTATTGGGA GCAAGAGTTT TCTCAGTTAA GCCCTCAAGC GACGGGGCAA 
CCGCCGCTAC TATCAGCATC ACGAGGTAGT TTTAATCAGA AAAATTTGCT CACCGCTCTA 
TGA
 
Protein sequence
MLEKTEFDAS SVLLSSQLPP IPAKRYFTIG EVADLYGVRS HVLRYWEQEF SQLSPQATGQ 
PPLLSASRGS FNQKNLLTAL