| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0998 |
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| Symbol | sucA |
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| ID | 6183126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 867880 |
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| End bp | 870750 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671616 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001797795 |
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| Protein GI | 171463682 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.162331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG AGCACATAAT GCAGGATCAA AGAGATAACT CCTATCTCCT CGGCGGAAAC
GCCCCCTACG TAGAGGAACT CTACGAATCT TATTTGCACG ATCCAGCTTC CGTAGCTGAT
CATTGGCGAG ATTATTTCGA TAACGTGAAA CAGGTTCCGG CGGTTGACGG TTCATCTCGA
ACTGACATTG CCCACGGTCC GATTGTTGCT TCATTTGCAG AGCGCGCTAA GCAAGGTCCA
ATCAGAACGA TTTCTGATTC AGCTGACTCA GAGATGGGCC GCAAACGCGT TGCTGTTCAG
CAGTTAATTG CCGCGTATCG TAACGTCGGT AATCGCTGGG CAAATTTAGA TCCATTAAAG
CGGACAGAGC GCCAGGATAT TCCTGAGTTA GATCCTGCTT TCTATGACTT TACTGATGGC
GATATGGATA TCGTCTTTAA TACTAGTAAT ACATTCTTCG GCAAGAACGA AATGTCATTG
CGCGATTTGC TCCAGGCATT GCGCGAGACT TATTGCGGCA CGATTGGTGT TGAGTTCATG
TTTATCGCTG ATCAGAAGAT CAAGAAGTGG TGGCAGGAAA AGTTAGAGTC CATTCGATCA
ACTCCACAAT TTAATGTGGA CGAAAAGCGT CAAATTTTGG ATCGCGTGAC TGCTGCCGAA
GGCTTAGAAC GCTACCTCCA GGCTAAGTAT GTAGGTCAAA AGCGTTTCTC CCTCGAGGGT
GGTGAAAGCT TTATTGCCTG TATGGACGAG TTAATTCGTG ATGCGGGTAA TAAAGGTGTT
CAAGAGATCG TTATTGGTAT GGCCCACCGC GGTCGTCTCA ACGTATTGGT AAATACTTTA
GGCAAGATGC CTAAAGACTT GTTTGCTGAG TTTGAGCACA AAGGTCCAGA GACACTACCT
GCAGGTGACG TTAAATATCA CCAAGGCTTC TCAAGCGATA TTTCTACTTC TGGCGGTCCT
GTTCACTTGT CACTGGCATT TAATCCTTCT CATTTAGAAA TCGTCAACCC AGTGGTTGAA
GGTTCTGCAC GTGCTCGTAT GGAGCGTCGT GGCGATATGC TCGGTGAGCA AGTAATGCCT
GTGTTGGTTC ATGGTGATGC TGCGATTGCA GGCCAAGGTG TGATGCAAGA AACGCTGGCA
ATGTCTGAGG TTCGTGGTTA TTCCACGGGC GGCACGATGC ACATCGTTAT TAACAATCAA
ATTGGTTTCA CAACATCTGA TCCCCGTGAC TTGCGTTCGA GCTTGTACTG TACCGACATC
ATGAAGGTGG TTGATGCGCC GGTATTGCAT GTGAATGGTG ATGATCCTGA AGCGGTAGTT
TTGGCAACCA AGTTGGCTGT TGAGTTCCGT ATGAAGTTCC ATAAAGATGT TGCGATTGAT
ATCATCTGCT TCCGTAAGCT TGGCCATAAC GAGCAAGATA CGCCTGCAAT GACTCAGCCT
TTGATGTACA AGATCATTGC TGCGCACCCT GGAACACGTA AGTTGTATGC CGATAAATTA
GAGACTCAAG GTGTATTGCC TGCCGGTACT GGCGACTTGA TGGTCAAGGA ATATCGCGCT
GCAATGGATG AGGGTAAACA AACCTCTGAT CTAGTATTAA GCAATTTCAA AGGAAAGTTT
GCGGTCGATT GGTCTCCATT CTTGAACAAG AAGTGGACCG ACGAAGCGGA TACAGCAACT
CCACTTACAG AGTGGAAGCG TTTGGCTGAG AAGATCTCAA CCATTCCCGA AGGTTTTAAA
GCGCATCCAT TGGTCTCTAA AGTTTATAAC GATCGTGCAG CGATGGGCCG TGGCGAGGTC
AATATTGACT GGGGTATGGG TGAGCACATG GCTTTCGCAT CTTTAGTTGC TAGTGGCTAC
CCAGTTCGTT TGTCGGGCGA AGATAGCGGA CGCGGCACCT TTACTCACCG CCATGCTGTT
TTGCATGAGC AAAACCGAGA GAAGTGGGAT ACCGGCACTT ACATCGCGCT TCAGCACGTT
ACTAAAGATC AGGCCCCATT TGTGGTGATT GACTCGATTC TTTCTGAAGA GGCTGTACTC
GGATTTGAAT ACGGCTACGC CGCTGCTGAG CCAAATACGC TTACTATATG GGAAGCTCAG
TTTGGCGACT TTGTTAATGG CGCCCAAGTG GTGATCGATC AGTTTATCGC CTCTGGTGAA
GTGAAATGGG GTCGTGCTAA CGGCTTAGTC ATGATGTTGC CACACGGTTA TGAAGGCCAA
GGCCCAGAGC ATTCTTCTGC ACGTCTTGAG CGTTTTATGC AGTTGTGCGC TGATACCAAT
ATGCAAGTCA TTCAGCCGAC AACTGCATCG CAAATCTTCC ATGTGTTGCG TCGCCAAATG
ATTCGTCAGT TCCGCAAACC GCTGATATTG ATGACGCCAA AATCATTGCT GCGTAATAAA
GAAGCTGCGT CACCCTTGTC AGAATTTACA AAGGGTGGTT TCCAAACCGT AATTGGCGAG
CGTGATGAGT CTATCGACGC TAAACAAGTA ACTCGTTTAG TAATGTGTTC CGGTAAGGTC
TATTACGACT TGGTTAAACA GCGTGCCGAG AAAAAGATTG GTGATGTCGT CATTATTCGC
TTGGAGCAGC TATATCCATT CCCGCACAAG GCATTGACTG CTGAATTGAA GAAGTATCCA
AAGCTGGAAG AGGTTATATG GTGTCAGGAT GAGCCACAAA ACCAAGGTGC TTGGTTCTTC
GTGCAACACA ATATCTTGGA AAACATGTCT GATGGTATGA AGCTGGGCTA TGCAGGCCGT
CCAGCATCTG CATCACCGGC TTGTGGTTAT GCCCATCTCC ACCAAGAACA GCAGAAGTCT
TTATTGAATG CGGCATTTGC CAAACTCAAA GGTTACGTGA TCACGAAGTA A
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| Protein sequence | MKDEHIMQDQ RDNSYLLGGN APYVEELYES YLHDPASVAD HWRDYFDNVK QVPAVDGSSR
TDIAHGPIVA SFAERAKQGP IRTISDSADS EMGRKRVAVQ QLIAAYRNVG NRWANLDPLK
RTERQDIPEL DPAFYDFTDG DMDIVFNTSN TFFGKNEMSL RDLLQALRET YCGTIGVEFM
FIADQKIKKW WQEKLESIRS TPQFNVDEKR QILDRVTAAE GLERYLQAKY VGQKRFSLEG
GESFIACMDE LIRDAGNKGV QEIVIGMAHR GRLNVLVNTL GKMPKDLFAE FEHKGPETLP
AGDVKYHQGF SSDISTSGGP VHLSLAFNPS HLEIVNPVVE GSARARMERR GDMLGEQVMP
VLVHGDAAIA GQGVMQETLA MSEVRGYSTG GTMHIVINNQ IGFTTSDPRD LRSSLYCTDI
MKVVDAPVLH VNGDDPEAVV LATKLAVEFR MKFHKDVAID IICFRKLGHN EQDTPAMTQP
LMYKIIAAHP GTRKLYADKL ETQGVLPAGT GDLMVKEYRA AMDEGKQTSD LVLSNFKGKF
AVDWSPFLNK KWTDEADTAT PLTEWKRLAE KISTIPEGFK AHPLVSKVYN DRAAMGRGEV
NIDWGMGEHM AFASLVASGY PVRLSGEDSG RGTFTHRHAV LHEQNREKWD TGTYIALQHV
TKDQAPFVVI DSILSEEAVL GFEYGYAAAE PNTLTIWEAQ FGDFVNGAQV VIDQFIASGE
VKWGRANGLV MMLPHGYEGQ GPEHSSARLE RFMQLCADTN MQVIQPTTAS QIFHVLRRQM
IRQFRKPLIL MTPKSLLRNK EAASPLSEFT KGGFQTVIGE RDESIDAKQV TRLVMCSGKV
YYDLVKQRAE KKIGDVVIIR LEQLYPFPHK ALTAELKKYP KLEEVIWCQD EPQNQGAWFF
VQHNILENMS DGMKLGYAGR PASASPACGY AHLHQEQQKS LLNAAFAKLK GYVITK
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