| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0997 |
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| Symbol | |
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| ID | 6182870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 866664 |
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| End bp | 867827 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671615 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001797794 |
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| Protein GI | 171463681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000910746 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTT TCGAAGTTAA AGTTCCACAA CTCTCCGAGT CAGTTGCTGA AGCAACACTG
TTGCAGTGGA AAAAGAAGGT TGGTGACGCT GTTGGTCAAG ACGAAATCTT GATTGAAATC
GAAACAGATA AAGTAGTTCT TGAAGTTCCA GCACCATCTA CTGGTGTGTT GACAGAAATT
GTTGTTGCTG ACGGTGGCAC GGTTGTTGCA GAACAATTGA TCGCTAAGAT TGATAGCACT
GCTGTTGTAG CCGCTGCTCC TGCTAAAGCA GCAGCTCCTG CCGCTAAAGC TGGCGCAGCC
GCCGCTCCTT CAGCTGCAAA AATTCTTGCA GAAAAGGGTA TCGACGCTGG ACAAGTTGCT
GGTTCTGGAC GTGATGGTCG TATCACTAAG GGTGATGCGC TAAACGCTTC TGCTGGCGGC
GCTAAGTCTG CCGCTTTGCC AAGCGCACCA ATTCCAACTG GTGATCGACC AGAAGAGCGT
GTTCCAATGA GCCGCTTGCG TGCTCGTATT GCTGAGCGTT TGCTTGAGTC CCAAGCAAAT
AATGTTATCC TGACTACATT TAATGAAGTC AACATGGGCC CAGTAATTGC TTTGCGTAAT
AAATACAAAG ATCAATTCGA GAAGACTCAT GGCGTGAAAT TGGGCTTCAT GTCTTTCTTT
GTTAAAGCGG CAACACATGC ATTGAAGAAA TTCCCACTTT TGAATGCTTC TGTTGATGGC
AATGACATCG TTTACCACGG TTACTTTGAC ATCGGTATCG CCGTTAGCTC ACCACGTGGC
TTGGTGGTTC CAATTTTGCG TGACGTTGAC CAAATGAATT TGGCTGATAT CGAGAAGAAA
ATTGCTGAGT TTGGTACTAA GGCTCGTGAA GGCAAGTTGT CAATCGAAGA ATTGACTGGT
GGCACATTCT CCATCTCTAA CGGTGGAGTA TTTGGCTCGA TGCTTTCTAC TCCGATCATT
AATCCGCCAC AATCCGCTAT CTTGGGTATC CACGCCACTA AAGACCGCGC TGTGGTTGAA
AACGGTCAAG TAGTTGTTCG CCCAATTAAC TACCTCGCTT TGTCTTACGA TCACCGCATC
ATTGATGGTC GTGAGGCTGT ACTCGGTTTG GTTGCCATGA AGGACGCTTT AGAAGATCCT
TCACGTCTCC TCCTTGATTT GTAA
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| Protein sequence | MAIFEVKVPQ LSESVAEATL LQWKKKVGDA VGQDEILIEI ETDKVVLEVP APSTGVLTEI
VVADGGTVVA EQLIAKIDST AVVAAAPAKA AAPAAKAGAA AAPSAAKILA EKGIDAGQVA
GSGRDGRITK GDALNASAGG AKSAALPSAP IPTGDRPEER VPMSRLRARI AERLLESQAN
NVILTTFNEV NMGPVIALRN KYKDQFEKTH GVKLGFMSFF VKAATHALKK FPLLNASVDG
NDIVYHGYFD IGIAVSSPRG LVVPILRDVD QMNLADIEKK IAEFGTKARE GKLSIEELTG
GTFSISNGGV FGSMLSTPII NPPQSAILGI HATKDRAVVE NGQVVVRPIN YLALSYDHRI
IDGREAVLGL VAMKDALEDP SRLLLDL
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