| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0996 |
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| Symbol | |
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| ID | 6184364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 865215 |
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| End bp | 866651 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671614 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001797793 |
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| Protein GI | 171463680 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000137288 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CTTTTGACGT AGTAGTTATT GGCGGTGGCC CTGGTGGCTA CATCGCCGCA
ATTCGTGCAG CGCAACTCGG CTTCAAAGTT GCCTGCGCTG AATCTAGTTC TTATGATGAC
CCGAAGGGTG AGCCACGTTT AGGTGGAACA TGCTTGAACG TTGGTTGCAT TCCCTCTAAG
GCCTTATTGG CTTCTTCTGA AGAATTTGAG AAGATCAATC ATCATGCTGC CGATCACGGA
ATTAAAGTGG GCGCTGTGAG CACCGACTCT AAGAAGATGA TCGCTCGTAA GGATGACATC
GTTACCAAGA TGACTGGTGG CATTCAGTAT TTGTTCCGTA AGAACAAAAT TACTTTGCTA
AAAGGCCATG CATCATTTGA AGGTAAGGGT TCCGATGGTT ATCAAATCAA GATTGATGGT
AAAGATAAAG AAACCGTTGC CGCAAAAAAT GTCATCATCG CTACAGGCTC TAAAGCACGC
CACCTTCCAG GCATCGCTGT CGACAATGTA TTGATTTGCG ATAACGAAGG CGCTCTTAAG
TTTGATTCTA CTCCTAAGAA ATTAGGAGTA ATCGGTGCCG GTGTGATTGG CTTAGAGTTG
GGTTCTGTAT GGCGCCGCCT TGGTGCTGAA GTAACCGTAC TTGAAGCTAT GCCATCATTC
TTAGGTGCTT GCGATGTAAG TATTGCTAAG GAAGCACAAA AGCTTTTTAC AAAACAGGGT
TTGAGTATTA ATACTGGTGT AAAAATTGGC GATGTTAAGG CTGATAAAAA GGGTGTAGTG
GTTAACTACA CTGATAGCGC TGGTAAAGCT GCTAAGTTGG AATGTGATCG TTTAATTGTG
TCTGTAGGTC GCGTACCAAA CACCGATAAA TTGAGCTTAG ACAAGATTGG CCTCAAAGTG
GATGAGCATG GCTTCATTCC AATTGATGAC CATACTTGTG CTACATCTGC GCCAGGCGTT
TACGCCGTTG GCGACGTAGT GCGCGGTCCT ATGTTGGCGC ACAAAGCTGA AGATGAAGGT
GTCTTGGCGG CTGAGGTGAT TGCCGGTCAA AAACCACACA TTGATTACAA CTGCATTCCT
TGGGTTATCT ATACCGATCC TGAAATTGCG TGGGTTGGTA AAACAGAACA AGCCCTTAAA
GAGGCAGGCG TTGCTTATAA AGCTGGTCAG TTCCCATTTG CTGCTAACGG CCGTGCATTG
GGCATGGGTC GTGCTGATGG TTTCATTAAA GTATTAGCTG ATGCTAAGAC TGATGAGATT
CTTGGTGTAC ACATCATTGG CGCAAATGCA TCTGACCTTA TTGCTGAAGC GGCAGTTGCA
ATGGAATTCA AAGCAGCAGC AGAAGATATT GCTCGTATCT GTCATGTACA TCCAAGTTTG
TCTGAAGTGA TGCGCGAAGC AGCGTTAGCG ACGGACTCAC GTGCATTAAA TATGTAA
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| Protein sequence | MSQAFDVVVI GGGPGGYIAA IRAAQLGFKV ACAESSSYDD PKGEPRLGGT CLNVGCIPSK
ALLASSEEFE KINHHAADHG IKVGAVSTDS KKMIARKDDI VTKMTGGIQY LFRKNKITLL
KGHASFEGKG SDGYQIKIDG KDKETVAAKN VIIATGSKAR HLPGIAVDNV LICDNEGALK
FDSTPKKLGV IGAGVIGLEL GSVWRRLGAE VTVLEAMPSF LGACDVSIAK EAQKLFTKQG
LSINTGVKIG DVKADKKGVV VNYTDSAGKA AKLECDRLIV SVGRVPNTDK LSLDKIGLKV
DEHGFIPIDD HTCATSAPGV YAVGDVVRGP MLAHKAEDEG VLAAEVIAGQ KPHIDYNCIP
WVIYTDPEIA WVGKTEQALK EAGVAYKAGQ FPFAANGRAL GMGRADGFIK VLADAKTDEI
LGVHIIGANA SDLIAEAAVA MEFKAAAEDI ARICHVHPSL SEVMREAALA TDSRALNM
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