| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0993 |
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| Symbol | |
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| ID | 6182978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 862001 |
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| End bp | 863203 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671611 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_001797790 |
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| Protein GI | 171463677 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000498703 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCTG AACGCGTTCT CTCTGGCATG CGCCCAACCG GTAATTTGCA CTTGGGTCAT
TACCACGGTG TTTTAAAGAA CTGGGTTCGC TTGCAGTCCG AATACCCATG TTTCTTTTTT
GTGGCTGATT GGCATGCATT AACGACTCAC TATGAGACCC CAGATGTCAT TGAGCAGTCT
GTATGGGATA TGGTGATTGA TTGGTTAGCA ACAGGTGTAG ATCCTAATCA AGCTACTCTG
TTTATTCAGA GCAAAGTGCC TGAACATACT GAACTCTTTC TATTGCTCTC AATGGGAACC
CCATTGGGTT GGTTGGAGCG AGTACCTACC TATAAAGATC AAATCGAGAA GCTCAAGGAA
AAGGATTTGC AAACCTACGG TTTTTTGGGT TATCCATTGC TGCAGGCCGC AGACATATTG
ATTTATCGTG CACAGTTTGT GCCGGTTGGT GAGGATCAGG TGCCACACGT AGAGATGACT
CGTGAAGTGG CTCGTCGCTT TAACTACTTA TATGGACGTG AACCAGGCTT TGAAGAGAAG
GCATTGGAGG CTGTCAAAAA GCTTGGTAGC AAGCGTGCCA AGATGTACGC TGAATTACGT
GTCGCTTTTC AGGAGCGCGG TGATGATGAG GCCTTGGAGC AAGCAAAAGC ATTGTTGCAA
GAAGCTCAGA GTTTGTCTAT GGCTGATCGT GAACGATTGT TTGGTTTCTT GGAGGGTGCC
CGCAAGATTA TTCTCCCAGA GCCACAGGCG TTATTAACAA CAGCATCCCG TATGCCTGGT
ATTGATGGGC AGAAGATGTC CAAGTCTTAT GGCAATACGA TTAGCATTCG CGAGAACCCA
GAGGATGTCA TCCAAAAGAT TCGCACGATG CCTACAGATC CTGCGCGTGT TTGTCGAACT
GACATTGGTG ATCCTGCGCG TTGCCCAGTT TGGCAGCTGC ATACTGTCTA TTCTTCGGAG
GAGACTAAGC AATGGGTTGA TAAGGGCTGT AAATCAGCTG GTATCGGGTG TCTTGAGTGT
AAACAGCCAG TGATTGATTT AATTTTGGCG GAGCAGCAAC CGATGCTTGA GCGTGCTCAA
AAGTACTTGG ATGATCCTAG CTTGTTGCGT TCCATCATTG CCGATGGTTG CGATAAGGCG
CGTAAGGTTG CCCAAGAGAC CATGCGCGAG GTTCGCGAGG CCATGGGTCT AGCATACGAT
TGA
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| Protein sequence | MFAERVLSGM RPTGNLHLGH YHGVLKNWVR LQSEYPCFFF VADWHALTTH YETPDVIEQS
VWDMVIDWLA TGVDPNQATL FIQSKVPEHT ELFLLLSMGT PLGWLERVPT YKDQIEKLKE
KDLQTYGFLG YPLLQAADIL IYRAQFVPVG EDQVPHVEMT REVARRFNYL YGREPGFEEK
ALEAVKKLGS KRAKMYAELR VAFQERGDDE ALEQAKALLQ EAQSLSMADR ERLFGFLEGA
RKIILPEPQA LLTTASRMPG IDGQKMSKSY GNTISIRENP EDVIQKIRTM PTDPARVCRT
DIGDPARCPV WQLHTVYSSE ETKQWVDKGC KSAGIGCLEC KQPVIDLILA EQQPMLERAQ
KYLDDPSLLR SIIADGCDKA RKVAQETMRE VREAMGLAYD
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