| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0991 |
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| Symbol | |
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| ID | 6183787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 860477 |
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| End bp | 861349 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671610 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001797789 |
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| Protein GI | 171463676 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000339523 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCTA TCGTTACCCC GATGTTTGAG GACGGGAGCT TAGATTTTGC AAGCCTACGT
TCTTTGTTGG ATTGGCATGT AGCGGAAGGC ACCGATGGAA TCGTGATTGT GGGAACTAGC
GGCGAATCTC CTACCGTTTC TGTTGAAGAG CACTGCGAAC TTATTCGTGT AACAGTTGAG
CAAATTGCTG GGCGTATACC GGTGATTGCC GGTACCGGTG GTAACTCGAC GATTGAAGCG
ATAGAACTGA CTAAATTCGC CAAGCAGGTT GGCGCAGATG TTAGCTTGCA AGTTGTCCCG
TACTACAACA AGCCAACACA AGAGGGTATG TATGCCCACT TTAAAAAGAT TGCTGAGTCC
GTGGACCTGC CTGTAATTTT GTATAACGTT CCCGGTAGAA CGGTTGCCGA TTTAGCGGGA
GATACAGTTG TCCGTTTGGC GGGCGTCCCA GGCATTATCG GAATTAAAGA GGCTACAGGT
AGCTTAGAGC GCGGCACTTT ATTGATCAAT GATCTTAAGC GTGCTGGCCA TCAAGATTTT
TCAGTATTCT CTGGCGACGA TCTCACGGCT GCAATGCTGA TGTTGATGGG CGGTAAAGGG
AATATTTCTG TTACTGCGAA CATTGCACCA CGGCTAATGC ATGAGCTCTG TATTGCAGCC
ATGTCTGATG ATGTAAGAAG AACCCGTGAA ATTCAATATC AATTGATTGC GGTTCATAAA
GCCATGTTTA CAGAGGCAAA CCCGATTCCA GTGAAGTGGG CCCTACATGA AATGGGCAAG
ATTACCGCAG GTATCCGTTT GCCACTCACT CCATTAAGCA ATTCCCTTCG TGAGCCGTTA
AAGGCAGCTT TAAAACAGGC CAATTTAATA TGA
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| Protein sequence | MPAIVTPMFE DGSLDFASLR SLLDWHVAEG TDGIVIVGTS GESPTVSVEE HCELIRVTVE
QIAGRIPVIA GTGGNSTIEA IELTKFAKQV GADVSLQVVP YYNKPTQEGM YAHFKKIAES
VDLPVILYNV PGRTVADLAG DTVVRLAGVP GIIGIKEATG SLERGTLLIN DLKRAGHQDF
SVFSGDDLTA AMLMLMGGKG NISVTANIAP RLMHELCIAA MSDDVRRTRE IQYQLIAVHK
AMFTEANPIP VKWALHEMGK ITAGIRLPLT PLSNSLREPL KAALKQANLI
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