| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0985 |
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| Symbol | |
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| ID | 6182891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 855587 |
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| End bp | 856339 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641671605 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001797784 |
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| Protein GI | 171463671 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.223489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG ATATATCAGC ATTACTGCGT TGGGTTTTAG TCGAAACCAG TCACCCAGGA
AATGTTGGCT CAGCCGCTCG CGCCCTTAAA ACGATGGGTT TTAGCGATCT AAGATTAATT
AGCCCAAAAA TCAAAGACAT TGGTAGCAGC CCGGAAGCAA TCGCCTTCGC TAGCGGTGCA
GCAGACATCC TAGAAAAATC TGTTGAGAGC GGCTCCTTAG CCTCCACAGT TAAGGGTTGC
TCCCTGGTTA TGGGTTTGAC CAGCCGAGAT CGAGAATTTG GACCCCCCGC CATGGACTGG
GAGTCAGCCA GATCTCTAAT TGCCAGCACG GTCCAAAGAC AAGGGAAAGT TGCCCTACTT
TTTGGCCCAG AAAGAACAGG CTTAGATAAC GAGCATCTAG CCCTATGTAC CCATCGGGTC
TGGCTAGATG CGAACCCCAA CTACCCCTCG CTTAATCTTG CCCAAGCCCT GATGATCTGT
GCCTACACCC TTCGAGAATC GCTTATCAGA GATCCTGGCG CTTCTAACTC CCTAGCCAAT
CGTGAGGAAA TGGCAGATTT TGCAGATCCT GCTGCTGTAG CAGCCATGCT TGAGCATTGG
CGTGAAGGTC TGGAGGCAAT TGGCTATTTA GACCCCGCCA ACCCCAAGAA GCTCATGCCC
CGCATCCAAG CCCTATTTGC CCGCAGCCAT CTCCATAAAG AAGAAATCGA TCTTTTGCGC
GGGATCGCAA AACAGATGCT CCTGAGAAAA TAA
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| Protein sequence | MNNDISALLR WVLVETSHPG NVGSAARALK TMGFSDLRLI SPKIKDIGSS PEAIAFASGA
ADILEKSVES GSLASTVKGC SLVMGLTSRD REFGPPAMDW ESARSLIAST VQRQGKVALL
FGPERTGLDN EHLALCTHRV WLDANPNYPS LNLAQALMIC AYTLRESLIR DPGASNSLAN
REEMADFADP AAVAAMLEHW REGLEAIGYL DPANPKKLMP RIQALFARSH LHKEEIDLLR
GIAKQMLLRK
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