| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0983 |
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| Symbol | |
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| ID | 6183111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 853842 |
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| End bp | 854624 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671603 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_001797782 |
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| Protein GI | 171463669 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.25629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCAGC ATTACACGAG CGCATTGCTC ATATCTGATT TACACCTGAC GCCGTCAGTG
CCCTTGACGG CGCAACGCTT TTTTGACTTC TGTGAAAAAG AGGCTCCAAA AGTACAGGCG
GTATATATCT TGGGTGACTT ATTTGAATAC TGGGTGGGTG ATGATGCGGC AGCACAATCC
CCATTTCAGC AAGAAGTTCA GTGTGCAATC GCAAATCTAT CCACCAAAGT AAAAACGTAC
TACCTACATG GCAATCGAGA CTTTTTAATC GGCCATAGCT TTGTTAAGAA AACCGGTATG
ACACTTCTGC CAGACCCAAG CGTTGTCGAA ATTGCATCTC AAAAATGGGT TTTAGCGCAT
GGTGACGCTT TATGCACAGC TGATATTGGT TATCAAGTAT TTCGTAGCTG GGTTAGAAAA
TCTTGGATAC AGAAAATCTT CTTGAGCTTG CCGCTCAATT GGCGCAAAGG AATTGCCCAG
CACTTACGTA GCAATAGCCA CTCACAGTAC CAACAAACAC AAAACTCCAG CACACACCAA
CTCAAAATGG ATGTCACAAA ACAGGCTTGC GCCGCTGTGC TGAAAGATCA ATCTTGCGAT
CAATTAATTC ATGGGCATAC CCATATGCCA GCGCACCATA AAGAATCCTT GAATGGGCAA
CACTGGCAAC GCTGGGTTTT ATCGGACTGG GATCTAGATC ATCCAGAAAG TCTACGCCCT
AGAGCAAGCG CCCTTCTGAT TGATAGCGCC GGTGCGCGCT ATGTTGACTT GATTAAAGAC
TAA
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| Protein sequence | MIQHYTSALL ISDLHLTPSV PLTAQRFFDF CEKEAPKVQA VYILGDLFEY WVGDDAAAQS
PFQQEVQCAI ANLSTKVKTY YLHGNRDFLI GHSFVKKTGM TLLPDPSVVE IASQKWVLAH
GDALCTADIG YQVFRSWVRK SWIQKIFLSL PLNWRKGIAQ HLRSNSHSQY QQTQNSSTHQ
LKMDVTKQAC AAVLKDQSCD QLIHGHTHMP AHHKESLNGQ HWQRWVLSDW DLDHPESLRP
RASALLIDSA GARYVDLIKD
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