| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0979 |
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| Symbol | |
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| ID | 6184029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 850306 |
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| End bp | 850977 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671599 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001797778 |
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| Protein GI | 171463665 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAA AAGAAAAATC AGAAGCTGCT TCAGAATCAA TTTTGCAAGA AGTTGCACCA
GAATATTGGG AGCAGGCTTG CAAAGAATTG ATGAAGCAAG ACCGCATTCT CAAAAAACTC
ATTCCTAAAT ATGGTTCCGG TTTTTTAGTC ACGCGCGGTG ATCCTTTTAA TACTTTGGCC
AGAGCGATTG TTGGTCAGCA AATTTCTGTA GCAGCAGCAC AATCCGTTTG GAACAAAGTA
GTTAGCGCTT GCAAAAAGAA GGTCACACCA AAAAATATCT TGGCGCTCTC CTCAGAGGAG
TTACGTGCCG CTGGATTATC TGGCCGCAAA GTTGAATACA TCCGAGATTT GGCGGATCAC
TTTGATTCAG GGCGCTTGCA TGCCAATCAA TGGAAAGATA TGGATGATGA GAGCGTTATT
AAGGAATTAA GCTCAATTCG GGGGATTGGC CGCTGGACTG CAGAGATGTT CCTCATTTTC
AATATGGTTC GCCCTAATAT TCTCCCCCTA GACGATGTTG GTCTAATTAA GGCTATTTCC
CTCAATTACT TCAGTGGGGA GCCCGTCAGC CGCCATGAAG CGCGCGAGGT GGCAGCCAAT
TGGGCCCCTT GGCGTACGGT TGCTACCTGG TATATGTGGA GAAGTATCGA CCCAATCCCA
GTTGAATATT AA
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| Protein sequence | MAVKEKSEAA SESILQEVAP EYWEQACKEL MKQDRILKKL IPKYGSGFLV TRGDPFNTLA
RAIVGQQISV AAAQSVWNKV VSACKKKVTP KNILALSSEE LRAAGLSGRK VEYIRDLADH
FDSGRLHANQ WKDMDDESVI KELSSIRGIG RWTAEMFLIF NMVRPNILPL DDVGLIKAIS
LNYFSGEPVS RHEAREVAAN WAPWRTVATW YMWRSIDPIP VEY
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