| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0976 |
|---|
| Symbol | |
|---|
| ID | 6183074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 846731 |
|---|
| End bp | 847981 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641671596 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_001797775 |
|---|
| Protein GI | 171463662 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTA TCGTTCATAA ATATGGTGGC ACCTCAATGG GCTCAACTGA GCGCATTGCC
AATGTTGCCA AACGCGTAGC TAAATGGATG CGCGCTGGTC ATCAAGTGGT GGTCGTACCC
TCAGCCATGT TGGGCGAAAC TAATCGCTTG CTAGGCTTAG CCAAAGAAAT TAATCCTGAA
GCAAGCCCGC GTGAATTAGA TCAAATTGCA TCGACAGGTG AGCAAGTAAG TTCTGGTCTA
TTAGCTTTAG CACTTATGCG CGAAGGTATT GATGCAGTAA GTTATGCTGG TTGGCAGGTA
ACGGTGCATA CCGATTCTGC TTTTACTAAA GCGTGCATCA AGAGTATTGA TGATAAAAAA
ATCTTGGCAG ATCTCAATGC GAGTCGTGCT GTCGTAGTGA CTGGATTCCA GGGCGTTGAT
CCTAACGGCA ATATCACAAC CTTAGGCCGT GGCGGTTCAG ACACTTCCGC GGTGGCGATG
GCTGCAGCAC TAAAGGCAGA CGAGTGCTTA ATCTATACAG ATGTTGATGG CGTTTACACC
ACTGACCCAC GTGTTTGTGA AGATGCGCGT CGCCTGGACA AAATTACTTT TGAAGAGATG
CTAGAGATGG CTAGCTTGGG CTCAAAGGTA TTGCAGATCC GCTCTGTTGA GTTTGCAGGT
AAATACAAAG TTAAAACCCG GGTTCTGTCT TCTTTGACAG ACCCATTGAT GCCTTTAGCT
GATGAGATGA GCTTAGGCAC CTTGATTACA TTTGAAGAGG ACAGCACTAT GGAAGCCGCA
GTTATTTCCG GCATCGCCTT TGCGCGCGAT GAAGCGAAGA TTACCGTTCT TGGAGTTCCT
GATCGTCCAG GCATTGCTTA TCAAATTCTT GGCCCGATTG CCGATGCCAA TATTGATGTG
GACATCATCA TTCAGAATCA ATCCGTTGAA GGTAAGACTG ACTTTACTTT TACTGTTCCA
CGCGCTAATT ATCAAAAAGC ATTGGACATT CTGAAGAACA CTGTTCAAGC TCATATCGAA
GCAAAAGAAA TCTCTGGTGA TCCAAAGGTT TCTAAAGTTT CAGTAGTGGG TGTAGGCATG
CGTTCCCACG TTGGGATTGC TAGCAAAATG TTCCGCACTT TGTCAGAAGA GGGTATCAAT
ATCGTGATGA TCTCTACAAG CGAAATCAAG ATCTCTGTGG TCATTGATGA GAAATACATG
GAATTGGCTG TACGTGCCTT GCATAAGGCA TTTGAGTTGG ATCAGAAGTA A
|
|---|
| Protein sequence | MALIVHKYGG TSMGSTERIA NVAKRVAKWM RAGHQVVVVP SAMLGETNRL LGLAKEINPE
ASPRELDQIA STGEQVSSGL LALALMREGI DAVSYAGWQV TVHTDSAFTK ACIKSIDDKK
ILADLNASRA VVVTGFQGVD PNGNITTLGR GGSDTSAVAM AAALKADECL IYTDVDGVYT
TDPRVCEDAR RLDKITFEEM LEMASLGSKV LQIRSVEFAG KYKVKTRVLS SLTDPLMPLA
DEMSLGTLIT FEEDSTMEAA VISGIAFARD EAKITVLGVP DRPGIAYQIL GPIADANIDV
DIIIQNQSVE GKTDFTFTVP RANYQKALDI LKNTVQAHIE AKEISGDPKV SKVSVVGVGM
RSHVGIASKM FRTLSEEGIN IVMISTSEIK ISVVIDEKYM ELAVRALHKA FELDQK
|
|---|
| |