| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0945 |
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| Symbol | |
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| ID | 6183004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 821816 |
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| End bp | 822649 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671571 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001797752 |
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| Protein GI | 171463639 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGTC TTTCAACCAG TACGCTTGCC GCTCTTGAGG AAATGCTCCA AAATACAGCG
CGCGCAGCTC CGGCAGATTT TTTGCCGATC TACTTATCCC GCGGCGCGCT AGGTGAACAA
CTTATCGGGC ACCTGAATCC GGAATTCATG AGCTACTTGC AAGGCTCCTT ACAAAAAGAA
GCTATTCCGC TCATTGCCAT GAGTCATGAC AAGCTCACGA TTCAACTAGA TAAACCAAGA
GATTTATCGA TCAGCCTTTA TCACTTAGCC AACCGTATGC GTTTGGGCGG ATATATCCCG
GGATGGCGTA ATGAAGATTT TGCTTGGGTA GATGTAAACG GTCATAAATA CTTTCGTATG
GAGCGTGCTG CATTTCGCAC CTTTGGCTTT CGTAGCATGG CGACGCACAT CAATGGCTAC
ACCCAAAGCA ATACGATTTG GTTGGGTAGG CGGAGCGAAA CCAAGTCTAC CGATCCAGGC
AAGTTAGACA ACTTAGCAGC TGGCGGCATT ACTGCCGATG AAACTCCTTG GGTCAGCGCG
CGTCGTGAAC TTTGGGAAGA GGCTGGTGTG CCCGAGCAAA TTGCCGATCA AATTGAGCCG
GTAGGTCGCA TTCACATGCG TCGCCCCTCC TTGGGTCGAG GCTTTCATGA CGAGCAACTT
TATATTTACG CCCTAGAATT AGCTGATAAC TTTGTTCCCA CCAACCATGA TGGTGAAGTA
AGTGGCTTTA TTGAAATCTC TCTAGCAGAA GCAGCTGCCA GGATCTTGGC AGACGAATTC
ACCTCTGACG CTGCTTTCGT GACTGCTGAC TTCATATTGC GTCGCAATAA ATAG
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| Protein sequence | MTSLSTSTLA ALEEMLQNTA RAAPADFLPI YLSRGALGEQ LIGHLNPEFM SYLQGSLQKE
AIPLIAMSHD KLTIQLDKPR DLSISLYHLA NRMRLGGYIP GWRNEDFAWV DVNGHKYFRM
ERAAFRTFGF RSMATHINGY TQSNTIWLGR RSETKSTDPG KLDNLAAGGI TADETPWVSA
RRELWEEAGV PEQIADQIEP VGRIHMRRPS LGRGFHDEQL YIYALELADN FVPTNHDGEV
SGFIEISLAE AAARILADEF TSDAAFVTAD FILRRNK
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