| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0941 |
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| Symbol | |
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| ID | 6184287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 817223 |
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| End bp | 819211 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671569 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001797751 |
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| Protein GI | 171463638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCC GTAAAACTTC CGAATACAGC GAATCGTCGA TTCAGGTCCT AAAAGGGCTA
GAACCAGTCC GTCAGCGGTC TGGTATGTAT ACCCGCACCG ATAATCCACT CCACATCATT
CAAGAGGTGC TTGATAACGC ATCCGATGAG GCTTTAGGAG GTTTTGGTAA ACAAATCATC
GTCACCATGC ATACCGACGG TAGCGTGAGT GTTGAGGATG ATGGGCGAGG CATTCCAGTA
GGGATGCATC CTACAGAGAA ATTACCCGTA GTAGAAATCG TATTTACCCA GTTGCATGCT
GGTGGTAAGT TTGAAAAAGG CACTGGGGGT GCTTATGCAT TCTCTGGTGG CTTGCATGGT
GTTGGTGTTT CGGTAACCAA TGCGTTATCC AAGAGATTAG AGGTAACTGT TTGGCGCGAT
GGCCAAAAGT CCACATTGAC CTTTGCTGAT GGCAAAGTGA TCGAAAAACT GAAATCGAAT
CCTTCTCCAA AAGAAGATAA GTCACATGGC ACTCGCGTAC GCGCATGGCC GGACGGCAAG
TATTTTGATG GCTTAGCCAT TCCAATCCCT GAGCTCATTC GTTTATTGCG TTCCAAGGCA
GTTTTATTGC CGGGCGTGAA GGTTACCCTG ATTCAAGAGA AATCCGGTGA TACCCAAACT
TGGCAGTACG CACAAGGCTT GCGTGGCTAC TTGAATGAAG CTATTGCACA AGCTGGTCAC
GGCGCAGAAG TGATTTCACC ATTCGAAGGC GAGCAATATG CCACTGGTTC TGGGGATAAT
GATTCTTTTG CTGAGGGCGA AGGTGCAGCT TGGGTAGTGT GTTGGACAGA AGATGGCGCG
CCAGTGCGCG AAAGTTATGT GAACTTGATT CCAACTCCAG CAGGTGGTAC CCATGAAAGT
GGTTTGCGTG AAGGCCTCTT TAATGCTGTT AAAGGTTTTA TTGAGATGCA CGCATTGCAA
CCTAAAGGTG TGAAGCTCAT GCCTGAGGAT GTATTTGCTC GCGCATCTTT CATTCTCTCT
GCCAAGGTTC TGGATCCTCA ATTCCAAGGT CAAATTAAAG AGCGTCTTAA TTCTCGAGAC
GCTGTACGTT TGGTTTCAGG CTATGTGAAA TCTGCCCTAG AGTTATGGCT CAATCAGCAC
GTTGATTACG GCCGCAAGTT GGCTGATTTA GTCATTAAGC AAGCACAAGC AAGAACTCGC
GCAGGTCAAA AGGTTGAGAA GAAGAAATCA TCCGGTGTTG CGGTGCTACC CGGCAAGCTT
ACTGATTGCG AGAGTCAGGA CATCAGCATG AATGAGATCT TTCTTGTAGA AGGCGACTCT
GCTGGCGGCT CTGCCAAAAT GGGGCGTAAC AAGGAATATC AAGCAATCTT GCCACTACGC
GGTAAAGTAT TAAATACTTG GGAGGCAGAG CGCGATCGCT TGTTTGCCAA CAATGAAGTG
CATGATATTG CCGTGGCGAT TGGTGTCGAC CCGCATGGTT TCAATGACAA TCCCGATTTA
TCCAATTTGC GATACGGCAA GGTTTGCATT TTGTCCGATG CGGACGTCGA TGGTGCGCAT
ATTCAGGTCT TGCTCTTAAC GCTGTTCTAT AAGCACTTCC CCAAATTGAT TGATTTGGGT
CATGTATATA TCTCTAGGCC ACCGCTATTT AGGGTTGATG CTCCAGCGCG CGACAAAAAG
CCAGCCCAAA AGATTTACGC ATTGGATGCT AATGAGCTTC AGGCTATTGA AGATAAATTG
CGTAAAGATG GTGTGAAAGA AGCCGCATGG CAGATCTCCC GCTTTAAAGG TTTGGGAGAG
ATGAGTGCTG AACAACTTTG GGATACCACT TTAAATCCAG ATACCCGTCG GTTATTGCCG
GTGACTCTGG GCACTTGGAC CGAAGACGAA ACATTTAAAA CAATGGATAT GTTGATGGGT
AAATCAGAAT CTGGCGCACG TCGCGATTGG TTTGAAGAGC GCGGCAATGA AGTGGAGGCA
GATATCTAA
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| Protein sequence | MATRKTSEYS ESSIQVLKGL EPVRQRSGMY TRTDNPLHII QEVLDNASDE ALGGFGKQII
VTMHTDGSVS VEDDGRGIPV GMHPTEKLPV VEIVFTQLHA GGKFEKGTGG AYAFSGGLHG
VGVSVTNALS KRLEVTVWRD GQKSTLTFAD GKVIEKLKSN PSPKEDKSHG TRVRAWPDGK
YFDGLAIPIP ELIRLLRSKA VLLPGVKVTL IQEKSGDTQT WQYAQGLRGY LNEAIAQAGH
GAEVISPFEG EQYATGSGDN DSFAEGEGAA WVVCWTEDGA PVRESYVNLI PTPAGGTHES
GLREGLFNAV KGFIEMHALQ PKGVKLMPED VFARASFILS AKVLDPQFQG QIKERLNSRD
AVRLVSGYVK SALELWLNQH VDYGRKLADL VIKQAQARTR AGQKVEKKKS SGVAVLPGKL
TDCESQDISM NEIFLVEGDS AGGSAKMGRN KEYQAILPLR GKVLNTWEAE RDRLFANNEV
HDIAVAIGVD PHGFNDNPDL SNLRYGKVCI LSDADVDGAH IQVLLLTLFY KHFPKLIDLG
HVYISRPPLF RVDAPARDKK PAQKIYALDA NELQAIEDKL RKDGVKEAAW QISRFKGLGE
MSAEQLWDTT LNPDTRRLLP VTLGTWTEDE TFKTMDMLMG KSESGARRDW FEERGNEVEA
DI
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