Gene Pnec_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0936 
Symbol 
ID6184245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp812581 
End bp813045 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content45% 
IMG OID641671566 
ProductATPase associated with various cellular activities, AAA_5 
Protein accessionYP_001797748 
Protein GI171463635 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGTAA ATGCCGCAAT CGCACTGCAA CGCCCACTCT TAATTAAAGG CGAGCCAGGC 
ACTGGAAAAA CGATGCTTGC CGAAGAAGTC GCGGCCACAC TCAATATGCC ACTCCTGCAA
TGGCATACTG AGTCGACCAC AAAAGCACAA CAAGGTCTTT ATGAATACGA TGCAGTAAGT
CGCCTACGAG ACTCTCAATT GGGGGATGAG AAGGTTAAAG ACATTCGGAA TTACATTGTT
AAGGGGGCAC TTTGGCAAGC ATTTGAAGCA GATGAACCTA CCGTATTGTT AATTGATGAA
ATCGACAAAG CAGACATTGA GTTTCCAAAT GACTTATTGC GAGAAATTGA TCGCATGGAA
TTTTATGTTT ATGAAACGTT AGGCGGTCCC GATGAGCTCA GAAAACGCCT AGAAGAGCTT
CTGAAGGAGC AAAAAGAATG GCATGGTGGT GGTAGTAAGT GGTAG
 
Protein sequence
MAVNAAIALQ RPLLIKGEPG TGKTMLAEEV AATLNMPLLQ WHTESTTKAQ QGLYEYDAVS 
RLRDSQLGDE KVKDIRNYIV KGALWQAFEA DEPTVLLIDE IDKADIEFPN DLLREIDRME
FYVYETLGGP DELRKRLEEL LKEQKEWHGG GSKW