Gene Pnec_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0935 
Symbol 
ID6184250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp811976 
End bp812350 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content47% 
IMG OID641671565 
Productputative periplasmic cytochrome type-c oxidoreductase signal peptide protein 
Protein accessionYP_001797747 
Protein GI171463634 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTA TGAAAAAACT CTCCATTCTT CCTCAATTGG CCGTAACTGC AGCTTTGGTT 
TTTGCTGGCG CTGTTGCTCA GGCTGATGAA GTAAAAGGTA ATGCTGCTGC AGGTAACAGC
AAGGTTTGGC TTTGTATTGG ATGCCATTCG ATTCCTGACT ATCGTGCGGA TTACCCATTG
ACATATAAGG TGCCCATGAT TGGTGGCCAA AATGCTGCCT ACATCGCTAC TGCATTGGCC
GCATACAAGA AGGGCGAAAG AAAGCATCCA ACAATGCGCT CGATTGCTGC AAGCTTATCT
GACCAAGATA TGGCCGATAT CGGCGAGTAC TATGCTGCGC AAACTGCCAG CTCGCTTAAC
AACCCATTGA AGTGA
 
Protein sequence
MISMKKLSIL PQLAVTAALV FAGAVAQADE VKGNAAAGNS KVWLCIGCHS IPDYRADYPL 
TYKVPMIGGQ NAAYIATALA AYKKGERKHP TMRSIAASLS DQDMADIGEY YAAQTASSLN
NPLK