Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0920 |
Symbol | |
ID | 6184361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 796429 |
End bp | 797193 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641671550 |
Product | protein of unknown function DUF152 |
Protein accession | YP_001797732 |
Protein GI | 171463619 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCT TAAATCCCAA TTGGCCCAAG CCACCTTCTG TTCATTCGCT ACAGAGCACT CGAGCTGGTG GTGTTAGTAA GCCACCATTT AATTCCCTAA ACCTGGGGGA TCATGTTGGT GATCAGATTG AGAACGTTTT GGTCAATCGG GCTATCTTCA CAAAAGCGTT GCCAGCAGAG CCTTTATGGC TAAAGCAGAC TCATAGCACG ATAGTGAGCA CCCCAGAGAG TCGGGCATTA AAACACCACG CTCTTATTGA GGCGGATGCT TCGGTTAGTA ATATCCCAGG AGATGTTCTG GTTGTTATGA CTGCAGATTG CCTGCCTGTG TTGTTTGCCA ATCGGCAGGG AACTGTTGTT GGAGTTGCTC ATGCGGGCTG GAGAGGGCTT TGCTCCGGAG TGCTAGAAAA TACTATTGCT GAGATGTTGA ATTTATCTAG CAAAGCTAAA GCGCCTGATT TGATTGCCTG GCTTGGTCCA GCAATTGGAC CCGATGCTTT TGAGGTGGGC GAAGATGTTG TTAGTGCATT TAGAGATTTT GGCTTACCGT TTTCAGAAGG TGCCTTCAAA CTGATTTCAA ATAAGCCGGG TAAATATCTT GCTGATATTT ATGAATTAGC AAGAGATCGT CTTAAGGCTT GTGGAATTCA GTTTATTTAT GGCGGTGAAT ACTGCACCAT GAAGGATGGC GAACAGTTTT TTTCTTATCG ACGCGATGGA GAAACCGGAA GATTTGCCAC TGCTATCTGG ATTGCAAAAG AATGA
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Protein sequence | MSFLNPNWPK PPSVHSLQST RAGGVSKPPF NSLNLGDHVG DQIENVLVNR AIFTKALPAE PLWLKQTHST IVSTPESRAL KHHALIEADA SVSNIPGDVL VVMTADCLPV LFANRQGTVV GVAHAGWRGL CSGVLENTIA EMLNLSSKAK APDLIAWLGP AIGPDAFEVG EDVVSAFRDF GLPFSEGAFK LISNKPGKYL ADIYELARDR LKACGIQFIY GGEYCTMKDG EQFFSYRRDG ETGRFATAIW IAKE
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