Gene Pnec_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0920 
Symbol 
ID6184361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp796429 
End bp797193 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content45% 
IMG OID641671550 
Productprotein of unknown function DUF152 
Protein accessionYP_001797732 
Protein GI171463619 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCT TAAATCCCAA TTGGCCCAAG CCACCTTCTG TTCATTCGCT ACAGAGCACT 
CGAGCTGGTG GTGTTAGTAA GCCACCATTT AATTCCCTAA ACCTGGGGGA TCATGTTGGT
GATCAGATTG AGAACGTTTT GGTCAATCGG GCTATCTTCA CAAAAGCGTT GCCAGCAGAG
CCTTTATGGC TAAAGCAGAC TCATAGCACG ATAGTGAGCA CCCCAGAGAG TCGGGCATTA
AAACACCACG CTCTTATTGA GGCGGATGCT TCGGTTAGTA ATATCCCAGG AGATGTTCTG
GTTGTTATGA CTGCAGATTG CCTGCCTGTG TTGTTTGCCA ATCGGCAGGG AACTGTTGTT
GGAGTTGCTC ATGCGGGCTG GAGAGGGCTT TGCTCCGGAG TGCTAGAAAA TACTATTGCT
GAGATGTTGA ATTTATCTAG CAAAGCTAAA GCGCCTGATT TGATTGCCTG GCTTGGTCCA
GCAATTGGAC CCGATGCTTT TGAGGTGGGC GAAGATGTTG TTAGTGCATT TAGAGATTTT
GGCTTACCGT TTTCAGAAGG TGCCTTCAAA CTGATTTCAA ATAAGCCGGG TAAATATCTT
GCTGATATTT ATGAATTAGC AAGAGATCGT CTTAAGGCTT GTGGAATTCA GTTTATTTAT
GGCGGTGAAT ACTGCACCAT GAAGGATGGC GAACAGTTTT TTTCTTATCG ACGCGATGGA
GAAACCGGAA GATTTGCCAC TGCTATCTGG ATTGCAAAAG AATGA
 
Protein sequence
MSFLNPNWPK PPSVHSLQST RAGGVSKPPF NSLNLGDHVG DQIENVLVNR AIFTKALPAE 
PLWLKQTHST IVSTPESRAL KHHALIEADA SVSNIPGDVL VVMTADCLPV LFANRQGTVV
GVAHAGWRGL CSGVLENTIA EMLNLSSKAK APDLIAWLGP AIGPDAFEVG EDVVSAFRDF
GLPFSEGAFK LISNKPGKYL ADIYELARDR LKACGIQFIY GGEYCTMKDG EQFFSYRRDG
ETGRFATAIW IAKE