| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0919 |
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| Symbol | |
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| ID | 6184436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 794681 |
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| End bp | 796315 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671549 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_001797731 |
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| Protein GI | 171463618 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.510253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCAG GCATGAATAC TGGTGCTACG CCTTCTTTGG CCCCGCATCA CATGGCGCTA
ATACCGTCAG AGCGTTTATC TGAAATTCAA AAAGAGTATT TCACCGAGTT AGCGCATATT
GCAACTAATC CAGAAGCCAT AGAGGTAAAG GATCGTCGTT TCGCAGGAAA AGCATGGCAT
TCATCATGGA GCAAGGTGAT TGCAGCTACT TACCTACTGA ATTCCAAGCA TTTAATGGCA
TTAGCCAATG CCGTTGAGAC GGATGACAAG TCTAAGCAAA AGATTTTATT CACTACAGAG
CAAATGATTG ATGCGCTCTC TCCATCGAAC TTTATTGCTA CTAATCCAGA AGTTCTAGAG
AGCATCATCA GCATTCAAGG TCAATCCATT CAAAAGGGGA TTGTGAACTT GTTGGGCGAT
ATGAAAAAAG GCAAGGTCTC GCAAACTGAT GAGTCGGCCT TTGAAGTGGG GGAAAATATT
GCGACCACAG AAGGTCACGT AGTCTTTCGT AATAAGTTAT TTGAATTAAT CCAATACACG
CCATTAACCG AACAAGTATT TGAGTGCCCT TATTTGATGG TGCCACCTTG TATTAACAAA
TATTACATTC TGGATTTACA GCCTGATAAT TCTGTAGTTC GTCATATGGT CAGCCAAGGC
CACACTGTTT TCTTGGTATC CTGGAAAAAT CCTGATGCCT CTATGGCTAA AGTGAGTTGG
GATGACTATG TTGGCAAGGG CGTTATTAAG GCGATTGATG TTGTTAAGGA AATTGGCGAT
ACCAAGCAAA TTAATATTCT TGGTTTCTGC GTTGGTGGCA CTTTAACGAC ATCGGCTCTA
GCTGTACTAG CGGCGCGTGA TGAACATCCG GCTGCAAGTT TGACCCTCTT TACCACCTTA
TTAGATTTCA CCAATACTGG CATTCTAGAT GTCTTTATTG ACGAAGGTAT GGTCGAGATG
CGTGAGAACA CCATCGGTGG TAAGGGTGGC AAATACGGAA TGATGTCCGG CCTAGATTTG
GGTAATACCT TTTCGTTTTT GCGTCCAAAT GATTTAGTGT GGAACTATGT TGTTGAGAAT
TACCTCAAGG GCAATTCACC GCCACCATTT GATTTGCTCT ACTGGAACGG AGACTCTACA
AACCTTCCTG GCGCTATGTA CTGTTGGTAC TTGCGACATA CTTACTTACA AAATGATTTA
GTCAAGCCGG GTAAGGTCAA AATTTGCGGC GAGAAGATTG ATTTGGGCAA GATTAAATGT
CCGGCGTATT TATACGCCTC ACAGGAGGAT CACATTGTTC CTTGGCAATC AGCCTATGAA
TCCACTCATA TTCTTCAGGG TAAGAACCGT TTCGTCTTGG GTGCCTCAGG CCATATTGCC
GGAGTAATCA ATCCGCCGGC AAAAAATAAA CGCTACTACT TTGAAAACAA TAAGATTGCG
CCGACTGCTG CAGATTGGCT CGAGGGTGCA AAACAAATTC CAGGAAGTTG GTGGCCCGAT
TACACCAAAT GGCTCGAACA ATATGCTGGC GAGAAAAGGC CAGCAAGTAC TACATTTGGT
AATGCTAAGT ACAAAAAGAT GGAAGCTGCA CCTGGTGTCT ATGTAAAAGA AAAAGCAACA
CCAGAACTCA ATTAA
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| Protein sequence | MFAGMNTGAT PSLAPHHMAL IPSERLSEIQ KEYFTELAHI ATNPEAIEVK DRRFAGKAWH
SSWSKVIAAT YLLNSKHLMA LANAVETDDK SKQKILFTTE QMIDALSPSN FIATNPEVLE
SIISIQGQSI QKGIVNLLGD MKKGKVSQTD ESAFEVGENI ATTEGHVVFR NKLFELIQYT
PLTEQVFECP YLMVPPCINK YYILDLQPDN SVVRHMVSQG HTVFLVSWKN PDASMAKVSW
DDYVGKGVIK AIDVVKEIGD TKQINILGFC VGGTLTTSAL AVLAARDEHP AASLTLFTTL
LDFTNTGILD VFIDEGMVEM RENTIGGKGG KYGMMSGLDL GNTFSFLRPN DLVWNYVVEN
YLKGNSPPPF DLLYWNGDST NLPGAMYCWY LRHTYLQNDL VKPGKVKICG EKIDLGKIKC
PAYLYASQED HIVPWQSAYE STHILQGKNR FVLGASGHIA GVINPPAKNK RYYFENNKIA
PTAADWLEGA KQIPGSWWPD YTKWLEQYAG EKRPASTTFG NAKYKKMEAA PGVYVKEKAT
PELN
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