| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0916 |
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| Symbol | |
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| ID | 6184232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 793203 |
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| End bp | 793763 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641671546 |
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| Product | polyhydroxyalkonate synthesis repressor, PhaR |
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| Protein accession | YP_001797728 |
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| Protein GI | 171463615 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.632682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTACCC GCGCTAAACG AGCTGGCGAA GATCGGCTCA TCAAGAAGTA CCCCAATCGT
CGTCTCTACG ACACTCAGAC AAGTACCTAT GTCACATTGT CAGATATCAA AAATTTGGTT
ATGACAGGTG AAGTATTCAA GGTGGTAGAC GCTAAAACTG AAGAAGATTT AACACGCAAT
ATCTTGTTGC AAATTATTCT TGAAGAAGAG GCTGGTGGTG CTCCAGTTTT CTCCACGCAA
ATGCTTTCCC AAATCATTCG CTTCTATGGA AACTCCATGC AAGGCTTAAT GGGAAACTAT
CTTGAAAAAA CCATGCAGTC ATTTGTGGAT ATCCACAATA AGCTTGGCGA TCAAACCAAA
GGTTTGGGTG CTGGAAGCAT GCCTGAAGCT TGGTCTCAGA TGATGAATTT GCAAAATCCA
CTCATGCAAG GCTTGATGGG AAGCTATATG GAGCAGAGCA AAGATTTATT TATCAAAATG
CAAGAACAAG TGCAGGGTTC ACAAAATATT TTTGGAAACT TCCCATTTAC TCAACAGCCC
AGCAAAACTG AAAAAGAGTA G
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| Protein sequence | MVTRAKRAGE DRLIKKYPNR RLYDTQTSTY VTLSDIKNLV MTGEVFKVVD AKTEEDLTRN
ILLQIILEEE AGGAPVFSTQ MLSQIIRFYG NSMQGLMGNY LEKTMQSFVD IHNKLGDQTK
GLGAGSMPEA WSQMMNLQNP LMQGLMGSYM EQSKDLFIKM QEQVQGSQNI FGNFPFTQQP
SKTEKE
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