| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0911 |
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| Symbol | |
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| ID | 6184128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 785321 |
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| End bp | 786070 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671541 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001797723 |
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| Protein GI | 171463610 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG GAAATCATTC AAAAAAGAAA TGTCATGCGC TTTTGCCAAC AGCTGGAACA
GGCTCGCGGC TAGGGGGCGC CTTGCCCAAG CAATTTCAAG AATTGGCTGG AAAGCCGATG
CTTTGCTATG CGCTTGAGGC TTTTCTTGAC ACCCCACAGG TTGAATCAAT CTGGATAGGG
GTTAGCGCAG GGTTTATTGA AAACCCTATT TTGCAGAACA TATCCAATGG GAATAAAGTC
ATTCAATTTT TGCCGACTGG TGGAAAAACC CGTCAAGAGA CGGTTAAAAA TACCCTAGCA
GCCATGCTCA ATGCTGGTTT ACCTGAAGAT GATTGGATAT TGGTTCATGA TGCAGCCAGG
CCAGGCATTA CTCAAGCTCT AATAGAAAAG CTCATTCATT CTGTGTGCGC ATTCAATGTG
GGCGGTATCT TGGCCGTTCC ATTGGCTGAC ACCCTAAAAA AAGCTGACCT TGACTCGGTT
ATTGCTGGAA ATATTCCACA CGCTGAAAAA ACGATTCCCA GAGACCATCT CTGGCAAGCG
CAAACACCGC AGATGTTTGG TCTAAAGCAA TTACACGATG CGCTTGAAAG TGCTATTCGT
CTCGAGGCGG ATGTCACTGA TGAGGCTAGC GCTATTGAGT TGACTGGGGC TAAACCTTTG
TTGATTGATG GTGCCGCACG CAACTTCAAG GTTACTCACC CGGCGGATTG GAAATTAATG
CAATTGCTAT TAAGCTCAGT CAGTAAATGA
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| Protein sequence | MASGNHSKKK CHALLPTAGT GSRLGGALPK QFQELAGKPM LCYALEAFLD TPQVESIWIG
VSAGFIENPI LQNISNGNKV IQFLPTGGKT RQETVKNTLA AMLNAGLPED DWILVHDAAR
PGITQALIEK LIHSVCAFNV GGILAVPLAD TLKKADLDSV IAGNIPHAEK TIPRDHLWQA
QTPQMFGLKQ LHDALESAIR LEADVTDEAS AIELTGAKPL LIDGAARNFK VTHPADWKLM
QLLLSSVSK
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