| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0909 |
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| Symbol | tig |
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| ID | 6183980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 783244 |
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| End bp | 784581 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671538 |
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| Product | trigger factor |
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| Protein accession | YP_001797721 |
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| Protein GI | 171463608 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGC AGATAGAAAA TTTAGGTTCA CTAGACCGCA AAATGACTTT GGAATTCGCT
CGCGCCGATT TGGCAAAAGC GCGTGAAGCC CGTTTGGCTA AAGTTGGTAA GTCCATGAAA
ATGGCAGGCT TCCGCCCAGG CAAGGTGCCA AAGAATCTCG TTGAAAAGCA ACACGGCATG
CAAGTCGATT TCGAATTGCA GTTTGATAAA GCGGCTGAAC TTTTTTATGA GTTAGCACAA
AAAGAGGGCG TTGCTTTAGC TGGCCAACCA CGCCTCGAAC CAAAGAGCGA AATTGATGCA
GAGAAGGTTG TCTTTGATGC CTTCTTTGAA GTGTTGCCAG AAGTAAAGAT CGGCGACTTT
AGTAAAGCTG AGGTTACTAA GTACACAACC GATATTGGTG AAGCAGAAAT TGATCGCGCC
TTAGATGCGT TGCGTAAGCA GCAAGTACAC TACCATCCAC GTGGCGAGGC TGGCCCTCAT
GGTGATGGCG GCTCTAACAC AGCAGCCCAA AATGGCGACC AAGTTGTCAT TAACTTTGTC
GGCAAGATTG ACGGAGTTGA GTTTGCGGGT GGAAAAGCCG AAAACTTTGA ATGCGTTTTA
GGTGAAGGTC GCATGCTTCC CGAGTTTGAG GCTGCAACTT TAGGCCTCAA GGTTGGCGAA
AGCAAATCCT TTCCATTAAG TTTCCCAGCT GATTATCACG GTAAAGATGT TGCGGGCAAA
ACAGCTGAGT TCACAATTAC GGTGAAGTCT GTAAATTGGG CGCACTTGCC AGTAGTTGAT
GATGCATTTG CATTGTCACT CGGCGTTACT GAAGGCGGTG TTACAAAAAT GCGCGCTGAA
GTAAAAGAAA ATTTAGACCG CGAAGTGAAG CGTCGTGTCA CAACATTGCT AAAGAGTGAA
GTAATGGACA AGCTTAATAG CTTGTGTGAA CTTGATGTTC CTAAGTCTTT GGTTGCTTCT
GAGCAAGAAC GTTTAGTTGA AGGTGCGCGT CAAGATTTAA TGCAGCGCGG TGTCCCGAAT
GCTAAGGACG CACCAATTCC AGCTGAAATC TTTGCTGAAC AGGCTACCAA ACGCGTTCGT
CTTGGCTTAA TTCTCAGCGA GCTGGTGAAG AATCAAAATT TGATTGCTAC TGCAGACCAA
ATCAAAGCTG AGATTGATGA GCAAGCAACT ACCTATGAAG ATCCAAAAGA GGTTATTCGT
TGGTTTTATC GCAATCCAGG TCGCTTGAAA GACATCGAAA ACCTCGTGCT TGAAGATAAT
GTTATTAAAT ATTTCACTTC ACAAGCTAAA GTAAACGATA AATCAGTGAC CTTTGAAGAG
CTCAGCAAGC TAAACTAA
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| Protein sequence | MAVQIENLGS LDRKMTLEFA RADLAKAREA RLAKVGKSMK MAGFRPGKVP KNLVEKQHGM
QVDFELQFDK AAELFYELAQ KEGVALAGQP RLEPKSEIDA EKVVFDAFFE VLPEVKIGDF
SKAEVTKYTT DIGEAEIDRA LDALRKQQVH YHPRGEAGPH GDGGSNTAAQ NGDQVVINFV
GKIDGVEFAG GKAENFECVL GEGRMLPEFE AATLGLKVGE SKSFPLSFPA DYHGKDVAGK
TAEFTITVKS VNWAHLPVVD DAFALSLGVT EGGVTKMRAE VKENLDREVK RRVTTLLKSE
VMDKLNSLCE LDVPKSLVAS EQERLVEGAR QDLMQRGVPN AKDAPIPAEI FAEQATKRVR
LGLILSELVK NQNLIATADQ IKAEIDEQAT TYEDPKEVIR WFYRNPGRLK DIENLVLEDN
VIKYFTSQAK VNDKSVTFEE LSKLN
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