Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0906 |
Symbol | |
ID | 6182982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 778567 |
End bp | 780999 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641671535 |
Product | ATP-dependent protease La |
Protein accession | YP_001797718 |
Protein GI | 171463605 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGCC ACTTATTACC ACCCTCTGAA CCCATTCAAC TACCTTTACT CCCATTAAGG GATGTAGTTG TATTTCCTCA TATGGTGATC CCATTGTTTG TGGGTCGTCC TAAATCGATT AAGGCTCTTG AAGCTGCAAT GGAAACAGGC AAAAACGTAC TATTAGTAGC CCAAAAAACG GCTGCTAAAG ATGAGCCTGT GATAGAAGAT CTCTATGAAG TTGGTTGCAT TGCAAATATC TTGCAGATGC TTAAGCTTCC GGACGGCACC GTAAAGGTTT TGGTTGGAGG CGTTCAACGT GCTGAAGTGA GTCAAATTGA AGATAGTCTT GGCTACTTCA ATTGCGAAGC AACGCCTACC GCCATCAATG CAATCGATGC TCACGAAACG GAAGCATTGC GCCGTGCAAT CATGGCACAG TTTGATCAAT ATGTAAAACT AAACAAAAAA GTACCCCAAG AAATTCTGTC GTCTTTGGGC AGCATAGATG ATCCGAGTCG CTTAGCCGAT ACCATCTGCG CCCATTTACC TGTGAAGCTG GAGCAAAAGC AGCGCCTGCT CGAAATGACG GACGTAGTTC AGCGCCTTGA GAACTTGCTT ACTGATCTTG AAAGTGAGAT TGATATCTTG CAAGTAGAAA AGCGCATTCG TGGCCGTGTG AAGCGTCAGA TGGAAAAGAG TCAGCGCGAG TACTATTTGA ATGAACAAGT AAAAGCTATT CAAAAGGAAT TGGGCGAAGG TGAAGAGGGT GCTGATCTAG AGGAGTTGGA GAAGCGCATC AAAGCTGCGC GTATGCCTAA AGAAGCATTA AAAAAAGCAG AGTCTGAACT TAAGAAACTT AAGCTGATGT CATCGATGTC TGCAGAGGCA ACCGTTATAC GCAACTTTAT TGACACATTG GTCAATCTTC CGTGGAAGAA AAAAACCAAG ATTAATAGTG ATCTCACTAA TGCTGAAAAA GTATTAGATG AAGACCACTA TGGTTTAGAT AAGGTTAAAG AGCGAATCTT GGAGTATCTC GCAGTCCAAC AGCGTGTTGA TCGCGTGAAA GCTCCTATTC TTTGTTTAGT TGGTCCCCCT GGTGTCGGTA AGACATCTCT GGGGCAGTCT ATTGCCCGCG CAACGAATCG GAAGTTTGTG CGTATGGCCC TAGGTGGCGT TCGCGATGAG TCTGAGATTC GTGGTCATCG TCGTACCTAT ATCGGCTCAA TGCCCGGCAA GATCTTGACT AGCCTTACTA AGGTTGGCGT TCGCAATCCC CTGTTCCTCT TAGATGAAGT GGATAAGATG GGCATGGATT TCCGCGGAGA CCCAGCTAGC GCTTTATTGG AGGTATTAGA TCCTGAACAA AACCATACAT TCCAAGATCA CTATGTTGAA GTGGATTTTG ATTTGTCAGA CGTGATGTTC GTGGCAACCT CAAATTCTTT AAATATCCCC GGTCCACTTT TAGACCGTCT TGAGATTATT CGTTTGGCTG GTTATACGGA AGATGAAAAA ACGAGCATTG CTGTGAATTA TTTGATTCCT AAACAAATCA AAAATAATGG CCTGAAAAAA GACGAGCTCA AGATTGAAGA TAGCGCTGTA CGTAACATGA TTCGGTATTA CACACGCGAA GCCGGTGTCC GTTCTTTAGA GCGTGAAATT AGCAAGATTT GCCGTAAGGT AGTTAAGCTT TTGCTCTTGA AGAAAGAGTC TGCGCCTGTT ATTGTGAATG TAGACAACCT TGAGAAGTTC CTATCCGTGC GCATGTATGA CTTTGGATTA GCGGGCAAGG AAAACAAAGT TGGGCAAGTA ACCGGTTTGG CATGGACTGA GGTTGGAGGT GATTTGCTGA CGATTGAAGC GGCAGTCATG CCAGGTAAAG GTGCAATTAC TCGTACAGGA TCTATCGGCG ATGTGATGAA GGAGTCGGTT GAGGCGGCTC GCACAGTGGT TCGCTCACGA GCAAGACGTC TTGATATTGC TGATGATTTA TTTGAGAAAA AGGATATTCA TATCCACTTC CCAGATGGCG CAACACCTAA AGATGGCCCA TCAGCTGGCA TTGCTATTAC TACAGCGTTA GTCTCGGTAT TTACTGACAT ACCAATTCGT TCTGACGTAG CCATGACGGG TGAAATTACA CTGCGCGGTG AAGTGCTTCC AATTGGCGGT TTAAAAGAAA AGCTATTGGC AGCTCATCGA GGTGGTATTA AATTGGCTCT GATTCCGGAA GAGAATGTGA AGGATCTCAT TGATATTCCA GATAATGTCA AAAATGCCAT TGAAATCATT CCTGTCCGTT GGATTGATAA GGTGCTTGAA TTGGCTTTGG AGCGTATGCC AGTTTCATTG CCTGAACCAA CCCCTGAAGA GTTAGCAAAA AAAGCCGCTG AAGCCAGCAA GGTCGGTGAC AAAGGCGCTA CTTCAGAGGT TCTTAAACAC TGA
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Protein sequence | MPGHLLPPSE PIQLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMETG KNVLLVAQKT AAKDEPVIED LYEVGCIANI LQMLKLPDGT VKVLVGGVQR AEVSQIEDSL GYFNCEATPT AINAIDAHET EALRRAIMAQ FDQYVKLNKK VPQEILSSLG SIDDPSRLAD TICAHLPVKL EQKQRLLEMT DVVQRLENLL TDLESEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI QKELGEGEEG ADLEELEKRI KAARMPKEAL KKAESELKKL KLMSSMSAEA TVIRNFIDTL VNLPWKKKTK INSDLTNAEK VLDEDHYGLD KVKERILEYL AVQQRVDRVK APILCLVGPP GVGKTSLGQS IARATNRKFV RMALGGVRDE SEIRGHRRTY IGSMPGKILT SLTKVGVRNP LFLLDEVDKM GMDFRGDPAS ALLEVLDPEQ NHTFQDHYVE VDFDLSDVMF VATSNSLNIP GPLLDRLEII RLAGYTEDEK TSIAVNYLIP KQIKNNGLKK DELKIEDSAV RNMIRYYTRE AGVRSLEREI SKICRKVVKL LLLKKESAPV IVNVDNLEKF LSVRMYDFGL AGKENKVGQV TGLAWTEVGG DLLTIEAAVM PGKGAITRTG SIGDVMKESV EAARTVVRSR ARRLDIADDL FEKKDIHIHF PDGATPKDGP SAGIAITTAL VSVFTDIPIR SDVAMTGEIT LRGEVLPIGG LKEKLLAAHR GGIKLALIPE ENVKDLIDIP DNVKNAIEII PVRWIDKVLE LALERMPVSL PEPTPEELAK KAAEASKVGD KGATSEVLKH
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