Gene Pnec_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0905 
Symbol 
ID6183125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp776838 
End bp778286 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content43% 
IMG OID641671533 
Producthypothetical protein 
Protein accessionYP_001797717 
Protein GI171463604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATA CCGTCCGTAA GCACCAAAGA ATTCTGCAGT TTGTATTGAT GCTTTTGATC 
GTTCCGTCTT TTGCTTTTTT TGGCGTCTCA AGTTATTCAA GCTTTTTAGA CAAGGAAACG
GATCTTGTCA AAGTCAACGG TAAGTCCATT ACAGCACAAG AAGTAGATAT GGCGGCGAAA
CGCCAAGCAG AGCGAGTTGG TGGAAATGTG CAGATTGCGC AAAGCCTCCA ATTCAGACAG
GCCATCTTAA ATGAGTTATT GCAACAAAGA ATTCTAGGTT TTGCTGTTAG TGATTTGCGG
CTACAAGTTG GCAAAGAAGC TTTGGTCAAG AGCTTGCAAA ACATTCCACA AATTCGCGCA
CTATATAAAC AAGACGGCAG CTTTGATGAT GCACGCTTTA AACAGTTATT GGCAAGCAAT
GGCTTGAATG AAGGGCAATT TTATGCTGGC CAAGCATTTG ATTTAAAAAT TAGTCAACTA
GTTAACTCAG TTGCTCGTAC TGAAATAGGA AGCCCAAAAC TATCTGAAAT TGTTTCAACT
CTTTATGAGA TGGAGCGTCA AGTCCAGATA ATGCCGTTTG ATGCAAAAGA TTATTTATCT
AAAGTAAACC CATCACAGGA GGAGTTGCAG GCTTTCTATG CAGCCAATTC CAAACTCTTT
GAAAGTCCTG AATATGTGGA TGTTGAATAC ATTGTTCTTA AGGCTGATTC CAAAGAAGAT
GCCAAGGTCT TTAGTGAAAA AGCAGACCAG TTTACCAAAA TTACCTATGA CCAGTCTGAT
AGTCTTAAGC CTGCTGCGGA TAAGTTAAAG CTGAATATTC AATCTCAGAA AACTGTAACG
CGCTCAGGCG CTACTGGTGT TGCAAAAGAT CATCCATTGG CCAATCCTAA AGTTGTACAG
TCACTTTTTA GCGATGAGGC AGTTAAAAAC AAACGCAATA TTGAAGCCGT ACAAACGGCG
CCCGGTGTAT TTGTTTCTGC TCGAGTTGTG ACTTTTCATC CGGCGCAAAT AATGCTATTT
AAAGATGTTG CTACTGAGGT AAAGCGGCAA GTAAGCCAGC GTATGGCTGA AAAGCTGGCA
GTGAGTGCAG CAGCTGAGCG TTATGCTACT TTGCAGAAGG ATCCCAAGAG TGCTTCTGGA
TTTGCTTCTC CAGTTTGGAT CTCCAGAAAT AAGCCGGGTA ATCTAGTTGG CGGAGCGCTT
GATCAGGTTA TGTCAATTAA TCCGGATAAA TTTCCCGCAC TTGTTTCAGT TAACAATCCG
GGCGTTGGGG CCATTCTGTA CCGAGTAGAT CAAGTGCGTC AACCGACTGG CATGGATGCA
AAGGTGCATA AGGCTCAGGC TTTAGCAGCC CAGTCTGAGT TCGCAGGTTT TATGGCTTAT
TGGCGTGACG TTGCTGGAGT TAAGGTTATT AACCCACTTA AACCACCATC TTCGGGCTCT
GGAGGTTAA
 
Protein sequence
MFDTVRKHQR ILQFVLMLLI VPSFAFFGVS SYSSFLDKET DLVKVNGKSI TAQEVDMAAK 
RQAERVGGNV QIAQSLQFRQ AILNELLQQR ILGFAVSDLR LQVGKEALVK SLQNIPQIRA
LYKQDGSFDD ARFKQLLASN GLNEGQFYAG QAFDLKISQL VNSVARTEIG SPKLSEIVST
LYEMERQVQI MPFDAKDYLS KVNPSQEELQ AFYAANSKLF ESPEYVDVEY IVLKADSKED
AKVFSEKADQ FTKITYDQSD SLKPAADKLK LNIQSQKTVT RSGATGVAKD HPLANPKVVQ
SLFSDEAVKN KRNIEAVQTA PGVFVSARVV TFHPAQIMLF KDVATEVKRQ VSQRMAEKLA
VSAAAERYAT LQKDPKSASG FASPVWISRN KPGNLVGGAL DQVMSINPDK FPALVSVNNP
GVGAILYRVD QVRQPTGMDA KVHKAQALAA QSEFAGFMAY WRDVAGVKVI NPLKPPSSGS
GG