| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0898 |
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| Symbol | |
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| ID | 6182848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 765473 |
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| End bp | 766336 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671526 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001797710 |
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| Protein GI | 171463597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT TTAAGCTTTG CGGTTATGAC GTAGGTTTAG ATCGTCGCTT TTTTCTTATT
GCTGGCCCAT GTGTAATTGA GTCTGAGCAA TCTGCTATTG ATATTGCGGG TCAATTAAAA
GAAATTACTG CTTCATTAAA AATTCCATTT ATCTACAAGT CCTCGTTTGA TAAAGCCAAT
CGTTCTTCAG GAACCTCTTT CCGAGGATTG GGGATGGAGA AGGGCTTAGA GATTTTGTCT
AAGGTCAAGA AACAGATTGA TGTACTAGTT CTAACAGATG TACATGACAT CAGTGAGATT
GCCGCAGTCG CTAGCGTTGT AGATGTTTTG CAAACCCCAG CTTTTCTTTG TAGGCAAACT
GATTTCATTC GAGCCTGTGC TCAGAGTGGA AAGCCAGTAA ATTTCAAGAA GGGTCAGTTT
CTATCGCCCC ACGAAATGCT CAATGTAATT GAAAAGGCTC GCGCTGCCGC ATTAGAAATT
GGCTTACCTG ATCAATTTAT GGTTTGCGAG CGCGGCGCTT CATTTGGTTA CAACAATCTT
GTATCCGACA TGCGCAGCTT GGCAATTTTG CGTGAATCTG AGGCGCCCGT AGTATTTGAT
GCTACTCATT CAGTTCAGCT ACCTGGCGGC CAAGGCAATT CCAGCGGTGG TCAGCGAGAG
TTTGTTCCTG TTCTGGCTCG TGCAGCCGTA GCGGTTGGTA TTAGCGGTCT TTTCATGGAG
ACGCATCCAG ATCCAGCAAA AGCCCTATCT GATGGCCCAA ATGCTGTGCC ATTGAATCGC
ATGAAAGATT TACTTGCATC GTTAGTTGCA ATTGATGACA TTGTTATGTC ATCAGGAGCT
TTTTTAGAAG ATAGTTTTAA GTAA
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| Protein sequence | MSTFKLCGYD VGLDRRFFLI AGPCVIESEQ SAIDIAGQLK EITASLKIPF IYKSSFDKAN
RSSGTSFRGL GMEKGLEILS KVKKQIDVLV LTDVHDISEI AAVASVVDVL QTPAFLCRQT
DFIRACAQSG KPVNFKKGQF LSPHEMLNVI EKARAAALEI GLPDQFMVCE RGASFGYNNL
VSDMRSLAIL RESEAPVVFD ATHSVQLPGG QGNSSGGQRE FVPVLARAAV AVGISGLFME
THPDPAKALS DGPNAVPLNR MKDLLASLVA IDDIVMSSGA FLEDSFK
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