Gene Pnec_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0891 
Symbol 
ID6183416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp759844 
End bp760314 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content39% 
IMG OID641671517 
ProductHydroxypyruvate isomerase 
Protein accessionYP_001797704 
Protein GI171463591 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.155506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATATTA AATTACTGAT TGAGCCCATT AATACATTTG ATATTCCTGG ATTTTATTTA 
TTCAAAACTG AACAGGCTTT AGATATCTTG AAAGAAGTTG ACTCTGACAA TCTTTATATA
CAGTACGACA TCTATCATGC GCAACGTATG GAGGGAGAGC TCAGCAAAAC GCTGGAAAAG
AATATTTCAA AGATTGCCCA TATTCAACTA GCCGATAACC CTGGTCGCAA TGAGCCCGGT
ACTGGTGAAA TTAATTACGC ACACTTATTT AAGCTGATCG ATCGGGTTGG CTACCAAGAG
TGGATTGGCT GTGATATAGA CCTATTACCC ATACTGAAGC TGGATCAAAT CTCTAAATTA
AACATTGTTT ACTTAAAGAC TCAAGGATGC TCATATGCCC GCAACATTAG TTGTATACTT
TCACGGCTTT CGATCATCGC CACGTTCAAG CAAGGCAGTA ATGACGGGTG A
 
Protein sequence
MDIKLLIEPI NTFDIPGFYL FKTEQALDIL KEVDSDNLYI QYDIYHAQRM EGELSKTLEK 
NISKIAHIQL ADNPGRNEPG TGEINYAHLF KLIDRVGYQE WIGCDIDLLP ILKLDQISKL
NIVYLKTQGC SYARNISCIL SRLSIIATFK QGSNDG