| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0885 |
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| Symbol | |
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| ID | 6184500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 757137 |
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| End bp | 757928 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671511 |
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| Product | hydrolase, TatD family |
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| Protein accession | YP_001797698 |
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| Protein GI | 171463585 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.46453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCATAG ACTCCCATTG CCATCTGGAT TTCCCGGAAT TCCAGTCTCG ATTACCAGAA
GTGCTTGCAA ATATGCAGGC AGCCAAAGTC AGTCATGCAT TGTGTGTTTC GGTTGATTTG
CCGGACTTTC CAAATGTATT GAAATTGGCA AAAGACCACC CCAATTTATA TGCCTCTGTG
GGCGTGCATC CTGATTATGA AGATACCCCC GAACCAAGCT TAGAATTCTT AGTTAGCACC
GCTATAGCGA ATTCCAAAAT TGTAGCTATC GGTGAAACAG GGCTCGACTA CTATCGCATG
GGTGATCGCA GCTATGAATC CATGGAATGG CAACGTGATC GCTTTAGAAC GCACATAAGA
GCGTCCATAG CATCTCAAAA GCCCCTCATT ATTCATACAC GCTCAGCATC TGAAGACACC
ATCAAAATCC TTAAAGAGGA GGGTGCTCAG AAAATCGGCG GGGTAATGCA CTGCTTTACA
GAATCATACG AAGTGGCCAA GGATGCCATG GATATGGGTT TTTATATCTC CTTTTCAGGG
ATTGTGACCT TTAAAAGTGC CAAGGATTTA CAAGAAACAT GCAAACGGGT GCCGCTAAAC
AGAATGTTAA TAGAAACGGA CTCACCTTAT TTGGCGCCAA TTCCGTATCG TGGCAAAACA
AATGAGCCAG CCTGGGTGTC AAAAGTAGGT GAATTTATCG CTGATCTGAA GGGCGTCTCT
GTGGAAGAAT TGGCCAACCA CACATCAGAT AATTTTTATC AATGTTTTCA ATTAAATAGA
CAATCATTAT GA
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| Protein sequence | MFIDSHCHLD FPEFQSRLPE VLANMQAAKV SHALCVSVDL PDFPNVLKLA KDHPNLYASV
GVHPDYEDTP EPSLEFLVST AIANSKIVAI GETGLDYYRM GDRSYESMEW QRDRFRTHIR
ASIASQKPLI IHTRSASEDT IKILKEEGAQ KIGGVMHCFT ESYEVAKDAM DMGFYISFSG
IVTFKSAKDL QETCKRVPLN RMLIETDSPY LAPIPYRGKT NEPAWVSKVG EFIADLKGVS
VEELANHTSD NFYQCFQLNR QSL
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