| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0883 |
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| Symbol | |
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| ID | 6184410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 755349 |
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| End bp | 755984 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671509 |
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| Product | dTMP kinase |
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| Protein accession | YP_001797696 |
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| Protein GI | 171463583 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATCAC ATACAGGATA TTTCATCAGC TTTGAAGGCA TTGATGGAGC AGGAAAGAGC
ACTCATATCG ATGCATTTCG CAATCTGATA CAAGAACGCT ACCCAAATAT AGAGGTAGTA
ATGACTCGTG AGCCGGGGGG TACGGTCCTA GGCGAGCAAT TGCGAAACTT GCTTCTCGAT
ACCCCTATGA ATCTTGAGAC TGAAGCCTTG CTCATGTTCG CCGCACGTCG CGAGCATCTG
TCTCAGGTTA TCAAACCGGC ACTTACGGCT GGCAAAATTA TCATTTCCGA TCGCTTTACC
GATGCCAGCT TTGCCTACCA GGGCGGTGGA CGTGGTTTGA GCTTAGCCAA GTTAAACGAT
TTGGAACGCT GGGTGCAGGG CCAACCGGAT GGCTCCATTT TGCAGCCGAA CTTAACCATC
TTGTTTGACC TACCCGGTGA TATTGCAGAG GCGCGACGCT CTAAAGTACA TACACCGGAC
AAATTTGAAA AGATGGACTT ATCTTTTTTC GAGAGAGTTC GTCAAGAATA CTTGCGCCGA
GCCAAGGATG ATCCCGACCG CTTTCATCTA GTCGATGCAA CCCAAACTCC TGAAGCTATA
TGGAATGGCT TGAAGTTGAT TCAGATTGAT CTATAA
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| Protein sequence | MTSHTGYFIS FEGIDGAGKS THIDAFRNLI QERYPNIEVV MTREPGGTVL GEQLRNLLLD
TPMNLETEAL LMFAARREHL SQVIKPALTA GKIIISDRFT DASFAYQGGG RGLSLAKLND
LERWVQGQPD GSILQPNLTI LFDLPGDIAE ARRSKVHTPD KFEKMDLSFF ERVRQEYLRR
AKDDPDRFHL VDATQTPEAI WNGLKLIQID L
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