| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0881 |
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| Symbol | |
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| ID | 6184445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 753235 |
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| End bp | 754242 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671507 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001797694 |
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| Protein GI | 171463581 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.876961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA CAACTCAAAT TCAGCAAAAT TGGCTGGATA ACCCCTCTTC CCTGGCCTGC
AATCTTGCTG AATGGGGCCT TATCATTATA GAAGGCCCTG ATGCCGCGAG TTTTTTGCAA
AATCAACTAA CCAATTCTGT TTTGGGGCTT ACTCTGACTC AGCTGGGATC GGTTGCTCAA
GGCTTTTCGA GCACTCGTCT AGTTGGCTAC TGCAGTCCCA AGGGCAGGTT ATTGGCAAGC
GCCTGGATTG GGTTGTTTTC TTCTGTAGAT AGTTCTCATG ATCGTTATGC ATTATTTATT
TCAAAAGATA TTGCAGCAAG CACGGCTAAG CGTTTATCTA TGTTTGTGCT TCGTTCAAAA
GTTAAAGTAA TTGATCTTTC TGATAGCTGG ACAGTAGCAG GGGTTTACGG CCCAAACAAT
CAGATCACCA GCAGCAATTT CAATGATCAA TCTATGGCAC TCAGGTTGCC GGATGTTTTG
GTTGGATCTA ATTTGCTTGC ACGTATTGTG ATGGCATACC CAAACCAAGA CCAAGCGGAT
ACTCCTGAAT CAAGAGAGAT TTTAGACGCC TGGAATGAGC TTGAGGTGCT GAGCGCTATT
CCACGCATTG TTGCTGCCAC ACAAGAACAA TTTGTGCCAC AAATGATTAA TTTTGAATCC
GTTACTGGCG TTGATTTCAA AAAAGGTTGT TACCCAGGGC AAGAAATTGT TGCTCGCAGC
CAATATCGCG GGTCTATTAA GCGCCGACTT CAGCTTGCCC ATGTGATTGG TAATCATGAG
GACAATAAAT TAACCCTTCC AGGCGCAGAA CTGTTTCACA GTGCTGACTC AGGGCAACCC
GCTGGAATGG TTGTTTTGTC TTCCAAAGCC CCATATGACC CTGGCCGCAC CGATCTTCAA
ATTGAGTGCA AATTAGAGGC TCTTGAGGAC GGGGAAATCC ACTTGGGCAG CTCTAGTGGG
CCTGTGTTAA AAATAGATCC ATTGCCCTAT CCGTTATTGG AAATTTAA
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| Protein sequence | MTQTTQIQQN WLDNPSSLAC NLAEWGLIII EGPDAASFLQ NQLTNSVLGL TLTQLGSVAQ
GFSSTRLVGY CSPKGRLLAS AWIGLFSSVD SSHDRYALFI SKDIAASTAK RLSMFVLRSK
VKVIDLSDSW TVAGVYGPNN QITSSNFNDQ SMALRLPDVL VGSNLLARIV MAYPNQDQAD
TPESREILDA WNELEVLSAI PRIVAATQEQ FVPQMINFES VTGVDFKKGC YPGQEIVARS
QYRGSIKRRL QLAHVIGNHE DNKLTLPGAE LFHSADSGQP AGMVVLSSKA PYDPGRTDLQ
IECKLEALED GEIHLGSSSG PVLKIDPLPY PLLEI
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