Gene Pnec_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0873 
Symbol 
ID6183059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp748822 
End bp749250 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID641671499 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001797686 
Protein GI171463573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.399983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTGA ATGGCAAATC TGTACCTAAA GCTCAGTTAG ATAAATTAGT TCAGCGTTCA 
GGCCAGCCAG ATAATCCTCA AGTACGCGAT CAAGCGCGCG AGATGCTGGT TACACGCGAG 
CTAATTGTGC AAGAAGCAGA TAAACGTGGT GTCCTTCAAA AAGAAATTGT TCGTGAACAG 
CTTGAACAAG CTCGCATGGG TGTATTGGTG TCAGCAGTAT TTGAAGACTA TGTTGAAAAA 
GAAGGTGTTG CTGAAGCGGA TCTAAAGGCT GCGTATGAGT CCGTAAAGGC TCAATACACC 
GGCAAGGAAT ACCATGTAGA GCATATCCTA GTTGAGAAGG AGGCGGATGC AAAAGCCATC 
ATTGCACAGA TAAAGGCTGG TGCAAGTTTT GAAGACATTG CCAAAGCAAA GTCTTTGGAA 
TCAGCTTAA
 
Protein sequence
MIVNGKSVPK AQLDKLVQRS GQPDNPQVRD QAREMLVTRE LIVQEADKRG VLQKEIVREQ 
LEQARMGVLV SAVFEDYVEK EGVAEADLKA AYESVKAQYT GKEYHVEHIL VEKEADAKAI 
IAQIKAGASF EDIAKAKSLE SA