| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0869 |
|---|
| Symbol | |
|---|
| ID | 6183097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 745461 |
|---|
| End bp | 745865 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641671495 |
|---|
| Product | putative ribonuclease BN |
|---|
| Protein accession | YP_001797682 |
|---|
| Protein GI | 171463569 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.119828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 0.359688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCATTG GTATCTACTT AAGCAGGGTA TTATTTAGCG CGTTGGAAGG CTGGATCAGT
GTAGTTTCGT TTGGCTTTCA ATTGGTTGCA ACCATCGCAC CAATCTGCCT TGCAGTAGTG
GTTTATGCGG TAGTTTATAA GGTTCTTCCG TACGCCAAAA TATTATGGTG CGACGCTTTT
ACTGGGGCAT TGGCACCAGC GCTCGCTTTT GAGTTGATGA AGTTTGGTTT TGCCATCTTC
CTTAGTCATA CCGCTTTCTA TAAGATGGTT TATGGAGCGT TTGCAATCTT CCCGCTAGGG
CTGATGTGGA TATATATGAC TTGGTGGATT ACCCTGATTG GCGCTGTTTT GGTGGCCAAT
CTACCTGACA TACGAAGTGG AGTCATTAGG GTTATTCGTT ACTAA
|
|---|
| Protein sequence | MGIGIYLSRV LFSALEGWIS VVSFGFQLVA TIAPICLAVV VYAVVYKVLP YAKILWCDAF
TGALAPALAF ELMKFGFAIF LSHTAFYKMV YGAFAIFPLG LMWIYMTWWI TLIGAVLVAN
LPDIRSGVIR VIRY
|
|---|
| |