| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0865 |
|---|
| Symbol | |
|---|
| ID | 6183292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 743607 |
|---|
| End bp | 744137 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641671491 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_001797678 |
|---|
| Protein GI | 171463565 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0822116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 0.468719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATGAAG AAAAAGCGCC GTATCTTACT GACTGGCGAA AACAGTTTAC TGGTAAAGTG
CTTACCGTTC TCTTGCCATC TAATACCAAT GAAGTTGCAG CAATTGTTAG GATATGTGCG
CAGCACAATA TTGCTTTAGT TCCGCAAGGC GGTCATACCG GTTTTTGTGG TGGCGCAACC
CCAGACAGCA GTGGGAAGCA AATTATTCTC AATCTCAAGC GAATGAATCA AATTCGCGAG
ATTGATAATG CAAACCAAAC AATTACGCTT GAAGCTGGAT GTATTTTGCA AGCAGTCCAA
GAAAAAGCTG TTGAGCACGG GTTTTTATTT CCTCTCAGCC TTGGTGCTGA AGGCAGCTGC
ATGATAGGCG GAAATTTAGC GACCAATGCA GGTGGCACCA ATGTTCTTCG CTATGGAAAT
ACACGAGATC TCTGCTTGGG TCTTGAGGTA GTTACCGCCA AAGGAGAGGT TTGGAATGGT
ATTAAGGGGC TTCGCAAGGA CAATACTGCG AGATTTATTT ATTGGAATTA G
|
|---|
| Protein sequence | MDEEKAPYLT DWRKQFTGKV LTVLLPSNTN EVAAIVRICA QHNIALVPQG GHTGFCGGAT
PDSSGKQIIL NLKRMNQIRE IDNANQTITL EAGCILQAVQ EKAVEHGFLF PLSLGAEGSC
MIGGNLATNA GGTNVLRYGN TRDLCLGLEV VTAKGEVWNG IKGLRKDNTA RFIYWN
|
|---|
| |