| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0859 |
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| Symbol | |
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| ID | 6182862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 740417 |
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| End bp | 741166 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671484 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001797673 |
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| Protein GI | 171463560 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.152413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.604475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTCTA ATAAATTTTT TGAGTCACGA ATTATTTGTG TCTTGGTGGC TAGCATATTT
AGCCCCTATG TTCTCGCTCA AAATCAAACC TCTAGCCTGG AGATCACGGC GACCGGCAGC
CAAGAGGCTA CGCAAAGCAT TTTGACTCCA ACCAAAATTC TTCAAGGGGA TGAGCTAGCC
AACAAATTGG GCGACACCCT GGGCGCTACG CTAACAAATG AATTGGGCGT GTCGGCAACA
GGTTATGGCG CAGGATCATC CAGACCGGTA ATACGGGGTC TGGAGGGTTC GCGCGTACAA
ATTTTGCAAA ATGGCTTGTC TGTGGGCGAT GTGTCCAATA TCTCACAAGA TCACGCTGTT
GGCAACAATA TGCAAAACAC GCATCAGGTT GAGATATTGC GTGGAGCGGC CGCCCTCCTC
TACGGTTCTG GCTCTAGCGG CGGTCTTATA AATGTTGTCA ACGACCGAAT CTTAACCAAC
TTACCCGATC GCCCTACTGG TGCATTTAAT ACTAGTTACG AAACAGTAAA TAATGGACGC
GCTGGATCAA TTGAGGTGGA TGGGGCAGTA GGATCGGTTG CCGTTCATGT TGATACAGCC
ATTAACAATG CAAATAACTA CTCTATTCCG GTAGTTCAAC CCAATCACAA GGTGAGCCGG
CTGGTGGTTG GACGGTGCCT CCAACAGGGA ATGGCGGCAA CAATTACACC GGTAAGCTTC
CAAATTCTTA TAGCAACCAA AATAATTTAG
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| Protein sequence | MKSNKFFESR IICVLVASIF SPYVLAQNQT SSLEITATGS QEATQSILTP TKILQGDELA
NKLGDTLGAT LTNELGVSAT GYGAGSSRPV IRGLEGSRVQ ILQNGLSVGD VSNISQDHAV
GNNMQNTHQV EILRGAAALL YGSGSSGGLI NVVNDRILTN LPDRPTGAFN TSYETVNNGR
AGSIEVDGAV GSVAVHVDTA INNANNYSIP VVQPNHKVSR LVVGRCLQQG MAATITPVSF
QILIATKII
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