| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0852 |
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| Symbol | |
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| ID | 6183102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 733765 |
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| End bp | 734391 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671479 |
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| Product | protein of unknown function UPF0044 |
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| Protein accession | YP_001797668 |
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| Protein GI | 171463555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
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| TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.221554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAC TTACCATTAC CCCCGCACAA CGCAAATCCC TCAAAGCTGA CGCACATGAT
TTAAGTCCTG TGGTGATGGT TGGCGGTGAC GGCCTAACCC CTGCCGTAAT TAAAGAGGCT
AAATTGGCCA TTAATCATCA TGGCCTGATC AAGATTCGGG TGTTTGGCGA TGATCGTGAG
TTGCGCATTG CTATGTATGA AGAGCTTTGC GATAAATTAG ATGCTGCGCC AGTTCAGCAT
ATTGGCAAGC TACTGGTTTT ATGGAAACCG AAGGATTTAG TAGATCAAGC CTTTAGTAAT
TTAGGGCGCT CTAGCAAGCA AACCAAAAAA TCGCTACAAG CACCCCGCAC TAAACGTCAA
CCAAATCGTA GCGCCTCTAA GGCTGGTATG CGGACAAGCG CTTCCGAAAG ATCGGATCGC
CGTTCTGCTT CAAATAAGTC TCCATTTGAA AGAGTGGCTG CAGTGAAATC AGCCACACCC
AAGAAAAGAG TATTACGTTC AGAAGCTGTG AAATCTAAGA TTGGCTGGTC TTCTCCTGGC
TATAGAAAAG CAGTTGCAGC ACCAGCGCCA ATTAAGAAGC GTAAAGCTCG AATGAGCAGC
ACCAAGAAAA AGTCTTTAGG TTCTTAA
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| Protein sequence | MTALTITPAQ RKSLKADAHD LSPVVMVGGD GLTPAVIKEA KLAINHHGLI KIRVFGDDRE
LRIAMYEELC DKLDAAPVQH IGKLLVLWKP KDLVDQAFSN LGRSSKQTKK SLQAPRTKRQ
PNRSASKAGM RTSASERSDR RSASNKSPFE RVAAVKSATP KKRVLRSEAV KSKIGWSSPG
YRKAVAAPAP IKKRKARMSS TKKKSLGS
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