| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0843 |
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| Symbol | |
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| ID | 6183667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 725139 |
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| End bp | 725810 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641671472 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_001797661 |
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| Protein GI | 171463548 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.55491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAAGA ATATTTTATT GCAGGTCTGG CCCATACCGG CCTTTGATGA TAACTATATT
TGGTGCATTC ACGATGGCAT CTCTGCTTTA GTGGTGGATC CGGGGGACGC GCAACCTACT
TTAGAGTTTT TAAGGGCAAA CTATTTAACC CTTAAGGGAA TCTTAATAAC TCACCACCAT
GCTGATCACA CAGGAGGGAT TCTCACCATT TTGGAAAATT TGGGTTCTGA AATACCCGTT
TATGGTCTAG CAGGGGATGA CATCCCGGGT CGAACTGCTG TAGCAATGCA GGATGACAAG
ATTGAATTTG CTGCTCCTCG AATTAGCCTA AAAGTATTTG AGGTCCCTGG CCATACCTTA
AGTCACATTG CCTATTTCGC CAATATGCAG GCAAATGTTG TGGAGCCAAT GCTTTTCTGC
GGTGACACTT TATTTGCTTC TGGCTGCGGA AGATTGTTTG AGGGTACGCC AACACAAATG
AGTGAGTCAT TGGGTAAATT TGCCTCCCTA CCAAAAAATA CTTTAGTCTT CTGCGCCCAT
GAGTACACCT TATCGAATAT TCGTTTTGCA TTGGCGGTCG AACCTAATAA TTTAAATTTA
TTATCATGGG CAGGGCAGGC GAAATCTCTG CGAGAACAAG GATTACCAAC GCTTCCAACT
ACGATAGGGT AG
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| Protein sequence | MDKNILLQVW PIPAFDDNYI WCIHDGISAL VVDPGDAQPT LEFLRANYLT LKGILITHHH
ADHTGGILTI LENLGSEIPV YGLAGDDIPG RTAVAMQDDK IEFAAPRISL KVFEVPGHTL
SHIAYFANMQ ANVVEPMLFC GDTLFASGCG RLFEGTPTQM SESLGKFASL PKNTLVFCAH
EYTLSNIRFA LAVEPNNLNL LSWAGQAKSL REQGLPTLPT TIG
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