| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0823 |
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| Symbol | |
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| ID | 6183045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 707446 |
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| End bp | 708045 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671452 |
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| Product | NADH (or F420H2) dehydrogenase, subunit C |
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| Protein accession | YP_001797641 |
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| Protein GI | 171463528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC GTTTAATTCA GCTAGCCGCT AACCTCAAGA AGGTTCTTGG TAAGCGCATT
CAGTCAGTTG AGATTGCTTT AGGCGAAGTC ACTGTTGTAG TGTATGCAGA TACCTACTTT
GAATCAGCTA TGCTCATGCG TGATGATCCA TCGCTCGCAT TTGAGCAGTT GATTGATTTG
TGTGGTGTGG ATTATCAAGA TTTCCGTGAT GGCGCCTGGG CTGGTCAGCG CTTTGGTGTT
GTAAGTCACT TATTGTCTTT GGAGCATAAC TGGCGCTTGC GTGTGCGCGT ATTTGCGCCG
GACGATAGTT ATCCTTTAGT GGCTTCTGTT TCTCCGGTAT GGAATTCTGC TAACTGGTTT
GAGCGTGAAG CTTTTGACCT GTATGGCATC TTGTTTGATG GTCATGATGA TTTACGTCGC
ATCTTGACTG ATTACGGCTT TATTGGCCAT CCATTTAGAA AAGATTTTCC AATCAGCGGC
AATGTGGAAA TGCGTTACGA CCCAGAGTTA AAGCGCGTTA TCTATCAGCC AGTCACAATT
GAGGCTCGCG AAATTACCCC ACGCATTGTT CGTGAAGAAC AGTACGGAGG TCCGGTTTAA
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| Protein sequence | MSERLIQLAA NLKKVLGKRI QSVEIALGEV TVVVYADTYF ESAMLMRDDP SLAFEQLIDL
CGVDYQDFRD GAWAGQRFGV VSHLLSLEHN WRLRVRVFAP DDSYPLVASV SPVWNSANWF
EREAFDLYGI LFDGHDDLRR ILTDYGFIGH PFRKDFPISG NVEMRYDPEL KRVIYQPVTI
EAREITPRIV REEQYGGPV
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