Gene Pnec_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0821 
Symbol 
ID6183005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp706595 
End bp706954 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID641671450 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001797639 
Protein GI171463526 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCTCG CTAATTACTT TCCTGTTCTG CTTTTTATCC TCGTAGGTAT TGGGGTGGGA 
TTAGTTCCCA TGTTCCTCGG AAAAATTTTG GCTCCTTCGA AGCCTGACGC TGAAAAACTT
TCTCCTTATG AGTGCGGTTT TGAAGCTTTC GAAGATGCAC GTATGAAGTT TGACGTGCGT
TACTACTTAA TTGCCATTCT CTTCATCCTC TTTGACTTAG AAACTGCTTT CCTATTCCCA
TGGGGTGTAG CGCTACGTGA CATTGGATGG CTTGGCTACG CCTCTATGGT GATCTTCCTT
TTGGAATTCA TTGTGGGATT TGTATATATC TGGAAAAAGG GCGCTCTCGA CTGGGAGTGA
 
Protein sequence
MNLANYFPVL LFILVGIGVG LVPMFLGKIL APSKPDAEKL SPYECGFEAF EDARMKFDVR 
YYLIAILFIL FDLETAFLFP WGVALRDIGW LGYASMVIFL LEFIVGFVYI WKKGALDWE