| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0817 |
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| Symbol | |
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| ID | 6182898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 701984 |
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| End bp | 704152 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671446 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001797636 |
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| Protein GI | 171463523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGT TTAAAAAAGC AGTAAAGAGT TTTCAATGGG GCACCTATCA GGTAACTATG
GAAACAGGCG AGATTGCTCG TCAAGCTGGC GGTGCCGTAA TCGTTAATGT GGATGACACA
GTGGTAATGG GTACAGTAGT TGCCTCTAAG TCTGCAAAAC CAGGCCAGTC ATTTTTCCCA
TTAACTGTTG ATTACCTAGA AAAAACCTAC GCAGCAGGCA AGATCCCTGG CGGTTTCTTC
CGTCGTGAAG GTCGTCCATC TGAAGGCGAA ACTTTAATTT CCCGTTTAAT TGACCGTCCA
TTACGTCCTT TATTCCCAGA AGGCTTCTTG AACGAAGTTC AGGTTGTTGT GCATGTGCTG
TCTATTAACC CAGATGTACC TTCTGATATT CCTGCTTTGA TTGCTGCCTC TGCGGCTTTA
GCTGTTTCAA GTATCCCATT TGCTGGCCCA GTAGGCGCTG CACGCGTTGG TTATGCAAAC
GGTCAGTACC TCTTAAACCC AACCCGTACA GAGCAAGCTA CTAGCGAACT CGACTTAATC
GTTGCCGGAA CGCAAGCTGC TGTATTGATG GTTGAGTCTG AAGCAAATCA ATTATCTGAA
GAAGTGATGT TGGGTGCAGT GGTTTACGGT CATGACCAAA TGCAAACGGC TATCAATGCA
ATTAACGACT TAGTGTGTGA AGCTGGCAAG CCAGAGTGGG ATTGGACTGC AGCTCCTAAA
GATGAGCCAT TTATTGCTAA GGTAACCGCA TTGGCTGAAG CACCATTGCG TGAGGCATAT
CAGATTCGTC AAAAGGGCGC TCGTTCAGAC AAGCTCAAAG AAATTTCTAA AGAAGTAATG
GCTAAGTTAT CCGAAGAGGG TGATGTTGAC GCTGTTGCTG TGAGCGACAT CATGTTTGAA
ATCGAAGCGA AGATTGTTCG TAGCCAGATT TTGAATGGCG AGCCACGTAT TGATGGTCGG
GATACTCGTA CAGTTCGCCC AATCGAAATT CGTAACGGCG TATTGCCACG CACACACGGT
TCAGCATTGT TTACTCGTGG TGAAACCCAA GCATTGGTCG TTGCAACATT AGGTACTGCA
CGTGACGAGC AAATTATTGA TGTGCTCGAA GGTGAATACC GCGATCGTTT CATGTTCCAC
TACAACATGC CTCCGTTTGC AACTGGCGAA ACAGGTCGTG TAGGTAGCCC TAAGCGCCGT
GAAATTGGTC ACGGTCGTTT GGCTAAGCGC GCTTTAATTC CAGTCCTTCC AAGTGCTGAA
GATTTTGCAT ACAGCATCCG AGTGGTTTCG GAGATTACTG AGTCCAATGG CTCATCTTCA
ATGGCTTCTG TTTGCGGTGG CTGTTTGGCA ATGATGGACG CTGGCGTTCC GGTTAAAGCG
CACGTTGCAG GTGTTGCAAT GGGCTTGATT CTTGATGGCA ATCGTTTTGC TGTATTGACA
GACATCTTGG GTGATGAAGA TCACTTAGGC GATATGGACT TTAAAGTAGC AGGTACAGCT
AATGGCATTA CTGCTTTGCA GATGGATATC AAAGTACAAG GCATCACTAA AGAAATTATG
CAAGTTGCTT TGGCGCAAGC TAAAGAAGGT CGTTTGCATA TTTTGAGCAA AATGCAAGAA
GCAATGGGTT CGGTTCGTAC AGAATTGTCG GCACACGCTC CACGCATGGT TTCATTCAAG
ATTCATCCAG ACAAGATTCG TGAAGTAATC GGTAAGGGCG GCGCAACTAT TCAGGCGTTG
ACTAAAGAAA CTGGTTGCAG CATTGACATT AAAGATGATG GTACTGTAAC GATTGCTTCT
ACATCTGCTG AAGGCATGGC TGAAGCAAAA GCACGAATCG AAGGCATTAC TGCTGAAGCT
GAAGTAGGCA AGATCTACGA AGGTCCAGTT GTGAAGTTGC TTGAGTTCGG TGCTTTGGTA
AACATCCTTC CTGGTAAAGA TGGTCTCTTG CACATCTCTG AAATTTCTAA TGAGCGCGTA
AAAGAAGTGA AGGACTATTT GGCGGAGGGC CAAGTGGTTC GCGTGAAATT GTTGGCCGCT
GATGAGCGTG GCCGTTTACG TTTGTCACTG AAAGCTGCAA TGGCTGATGA GGGCGGCACG
ATTGCTCCCT TAGCTGGCGC TGCTGAAGTG GCTACAGAGG CTGCTCCAGC GACTGGCGAA
TCTGCTTAA
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| Protein sequence | MTMFKKAVKS FQWGTYQVTM ETGEIARQAG GAVIVNVDDT VVMGTVVASK SAKPGQSFFP
LTVDYLEKTY AAGKIPGGFF RREGRPSEGE TLISRLIDRP LRPLFPEGFL NEVQVVVHVL
SINPDVPSDI PALIAASAAL AVSSIPFAGP VGAARVGYAN GQYLLNPTRT EQATSELDLI
VAGTQAAVLM VESEANQLSE EVMLGAVVYG HDQMQTAINA INDLVCEAGK PEWDWTAAPK
DEPFIAKVTA LAEAPLREAY QIRQKGARSD KLKEISKEVM AKLSEEGDVD AVAVSDIMFE
IEAKIVRSQI LNGEPRIDGR DTRTVRPIEI RNGVLPRTHG SALFTRGETQ ALVVATLGTA
RDEQIIDVLE GEYRDRFMFH YNMPPFATGE TGRVGSPKRR EIGHGRLAKR ALIPVLPSAE
DFAYSIRVVS EITESNGSSS MASVCGGCLA MMDAGVPVKA HVAGVAMGLI LDGNRFAVLT
DILGDEDHLG DMDFKVAGTA NGITALQMDI KVQGITKEIM QVALAQAKEG RLHILSKMQE
AMGSVRTELS AHAPRMVSFK IHPDKIREVI GKGGATIQAL TKETGCSIDI KDDGTVTIAS
TSAEGMAEAK ARIEGITAEA EVGKIYEGPV VKLLEFGALV NILPGKDGLL HISEISNERV
KEVKDYLAEG QVVRVKLLAA DERGRLRLSL KAAMADEGGT IAPLAGAAEV ATEAAPATGE
SA
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